Xenopus laevis (African clawed frog): 594865
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Entry
594865 CDS
T01010
Symbol
cdh3.L
Name
(RefSeq) blastomere cadherin
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04371
Apelin signaling pathway
xla04514
Cell adhesion molecules
xla04520
Adherens junction
xla05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
594865 (cdh3.L)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
594865 (cdh3.L)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
594865 (cdh3.L)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
594865 (cdh3.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
594865 (cdh3.L)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
594865 (cdh3.L)
04090 CD molecules [BR:
xla04090
]
594865 (cdh3.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
594865 (cdh3.L)
Cell adhesion molecules [BR:
xla04515
]
Cadherins
Major cadherins
594865 (cdh3.L)
CD molecules [BR:
xla04090
]
Proteins
594865 (cdh3.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
He_PIG
Cadherin_4
VPDSG-CTERM
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
594865
NCBI-ProteinID:
XP_018112394
Xenbase:
XB-GENE-864850
UniProt:
A0A974HNL4
A0A1L8GKW6
LinkDB
All DBs
Position
4L:complement(55350923..55385139)
Genome browser
AA seq
905 aa
AA seq
DB search
MRLTGRVKFLFGKVAVQKQAHMGGTDKFRYPSVWLCGLLCLLQVVPSINVDVSGCQPGFS
SANYTFSVNRRELERGRKLGKVNFVDCTTRKHGLYDVGDSRFRVLPDGTVLVKRHVKLHS
KDTRFTISTWDARGIKHSTNISVVNKRHRSGEEARSRSSELPVLTFPEKHTGLKRKKRDW
VIPPIKVSENERGPFPKRLVQIKSNKEKLSKVFYSITGQGADTPPEGIFRIEKETGWMQV
TRPLDREEYEKYVLLSHAVSENGASVEEPMEITVTVIDQNDNRPKFTQPVFRGSVREGVQ
PGTKVMSVSATDDDDNIDSLNGVIAYSILKQDPEEPIPNLFTINRETGVISLIGTGLDRE
KFPEYTLTVQAADLDGAGLTAEGKAVIEITDANDNAPIFDSKTYTALVPENEVGFEVQRL
SVTDLDMPGTAAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFEVRKQYVIQITV
ENAVPFSVPLPTSTATVTVTVEDVNEAPVFVPVVSRVDVSEDLTRGEKIVSLVAQDPDKQ
QIQKLSYFIGNDPARWLTINKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVPVGTG
TGTLILHVLDINDNGPVPSPRVFTMCDQNPEPQVLTITDADIPPNTYPYSVSLSHGSELT
WKAELDSKGTSMRLSPTQQLKKGDYSIYVLLADAQANQQLTVVNATVCICEGKAIKCQEK
LVAGFDLPIILVILGSILALLILSLLLLLFLKRKKVVKEPLLLPEDDTRDNIFYYGEEGG
GEEDQDYDLSQLHRGLDARPDIMRNDVVPTLMSVPHYRPRPSNPDEIGNFIDENLDAADN
DPTAPPYDSLLVFDYEGSGSEAASLSSLNSSNSNNEHDYNYLNDWGPRFRKLADMYGGDD
DDDEE
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttaacgggacgagtgaagtttctattcgggaaggtggctgtacagaagcaggct
cacatggggggcaccgacaagtttagatacccgagcgtgtggctttgcggactgctttgc
ttgttgcaggttgtgccttccataaatgtggatgtgtctggatgccagcctggattttcc
tctgcaaactacactttttctgtgaaccgtagggagctggagaggggcagaaagcttggc
aaagtgaactttgttgactgcacaacccggaaacatggtttatatgatgtgggagattct
agattcagggtgctgccagatggcactgttctagtaaaacgccacgtgaaactccacagc
aaggacaccagatttacaatcagtacgtgggatgcacgtggcattaagcactctactaac
atttctgttgtgaacaaacgtcatcgatctggagaggaagctcgctcaagatcttcagag
ctaccagtgctgacttttccagagaagcacaccggcctgaaaaggaagaagagagactgg
gtcatccctcctatcaaggtttctgagaatgaacgtgggcctttccccaaacgtcttgtg
cagattaaatccaacaaagagaagttaagtaaggttttctatagtattactgggcaaggg
gcagacacccctcctgaaggcatttttcgtatagagaaggagacgggatggatgcaagtt
acccggcctttggatcgtgaagaatatgagaaatatgtgctgctttctcatgctgtttct
gagaatggtgcttctgtggaggagccgatggaaataacagtcactgtgattgatcagaat
gataaccgtcccaagttcacacagcctgtgttcagaggatctgtcagggagggtgtgcag
ccaggcaccaaggtgatgtctgtatctgcaacagatgatgatgacaacatagacagcctg
aatggtgtcattgcctattccattctgaagcaggatcctgaggaaccaataccaaacttg
tttacgataaaccgagaaactggagtcattagcttgattgggacaggtttggacagagag
aaatttccagaatatacacttactgtgcaagctgcagatctggatggtgcaggactgact
gcagagggaaaagctgttatagagatcacggatgcaaacgacaatgctccaatttttgat
tcaaaaacttatacagcactggtcccagagaatgaagttggttttgaagttcagagactg
tctgttacagacctggatatgcctggtactgctgcatggcaggcagtctacaagattagg
gttaacgagggagggttttttaatattaccacggatccagagtctaatcaaggaatatta
acaactgctaagggtctggattttgaagtaaggaagcagtatgtgatacaaatcactgta
gagaatgctgtacctttctcggttccactaccaacctctactgctacagttactgtgacg
gtggaggatgtcaatgaagccccagtctttgtaccagttgtcagcagagtagatgtgtct
gaggaccttacacgtggcgagaaaatagtttcccttgtagcccaggaccctgataagcaa
caaatacaaaaattaagctacttcattggcaatgacccagctcgctggcttaccataaat
aaggacaatggcattgtcactggaaatggaaacttggatcgggagtcagagtatgtcaag
aacaatacatatacagtcatcatgctggtaacagacgacggtgttcctgttggcactggc
accgggacactcattctgcatgtgctggatatcaatgacaatggtcctgtacccagccct
cgagtcttcaccatgtgtgatcaaaaccctgagccccaagtattaacaatcactgatgcc
gacatccctccaaacacctacccatacagcgtttcactttcacatggctcagagttgaca
tggaaggctgaacttgacagcaaaggaacatcaatgcgtctcagtccaacacagcagctg
aagaaaggagactacagcatctatgtgcttctggctgatgctcaagctaatcagcagctg
actgtggtgaacgcaactgtgtgcatctgtgagggaaaagcaataaaatgccaggaaaaa
ctagttgctggttttgatttgccaatcatccttgtgatcttgggttcaatcttggctttg
ctgatcttatccttgctgctgctcctgtttctgaagaggaagaaggttgtgaaagagcca
ctacttttgccagaggatgataccagggataatatcttctattatggagaggaaggtgga
ggtgaagaggaccaggattatgacttgagccagctgcatagaggcctagatgctcgtcca
gacataatgaggaatgatgtggtccccaccctgatgtctgtcccgcactacagacctcgg
ccttcaaacccagatgaaattggtaacttcattgatgagaacttggatgcagctgacaat
gaccccactgctcccccatacgactctcttttagtgtttgattacgaaggcagtggctct
gaggccgcatcgctcagctctctgaactcttccaactcgaataatgagcatgattacaac
tatctgaatgactggggcccccgctttagaaagttagcagatatgtatggtggagatgat
gatgatgatgaagagtag
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