Xenopus laevis (African clawed frog): 606489
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Entry
606489 CDS
T01010
Symbol
dcp2.L, dcp2
Name
(RefSeq) decapping mRNA 2 L homeolog
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
606489 (dcp2.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
606489 (dcp2.L)
Enzymes [BR:
xla01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
606489 (dcp2.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
606489 (dcp2.L)
mRNA degradation factors
5'-3' decay
Decapping complex
606489 (dcp2.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
CCSAP
Motif
Other DBs
NCBI-GeneID:
606489
NCBI-ProteinID:
NP_001089058
Xenbase:
XB-GENE-966975
UniProt:
Q45NB9
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Position
1L:complement(187743125..187774797)
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AA seq
419 aa
AA seq
DB search
METKRLEVPDGVLDDLCSRFILHIPSEERDNAIRLCFQIELAHWFYLDFWMQNIPGLPQC
GIRDFAKAVFQHCPFLLPNGEDIQRVLNEWKEYKMGVPTYGAIILDESHENVLLVQGYLA
KSGWGFPKGKVNKEEVSHDCAAREVYEETGFDIKDRMCNNDYIELKIIDQLARLYIVPGV
PKDTKFNPKTRREIRNIEWFPIEKLPCHKNDMTPKSKLGMAPNKFFMVIPFIRPLRDWLH
RKFGDSSDSDNGFASAGSTPSKPNAEKSKSKVCCISQFSELNPTDQAIKNKQPQKPCSHL
NTAEMSEMLKNKNSNLRNNGKKQHQDSPNPKKKANGAQNQQVKQQISILKSERKLNPRRL
NDTFGADSALDMCYPSDEQQCNSEEAPDTCHDTYQCSFSSRAFLNFHFDRDAIMKSLDM
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaacgtttggaggtgccggacggagtccttgacgacctttgcagtcggttt
attttacacattcccagtgaagaaagagacaatgctattagactttgcttccaaattgaa
ctggcccactggttctatctggacttctggatgcagaacattccaggcctgcctcagtgc
gggataagagactttgctaaagcagtcttccagcattgtccatttttacttcctaatggt
gaagatatacagagggttctgaatgagtggaaagaatacaaaatgggagtgccaacctat
ggtgccattattctagatgaatcccatgaaaatgtgctgcttgttcaaggttatttagca
aaatctgggtgggggtttccaaaagggaaagtgaataaagaggaagtctctcatgactgt
gccgctcgagaggtttatgaagagactgggttcgatatcaaagatcgcatgtgcaataat
gactacattgaactgaagattattgaccagttagctcgtttatacatcgttcctggagta
cccaaagacacaaagtttaatccaaaaactaggagagaaatccggaacattgagtggttt
ccaatcgaaaaattgccttgccataaaaatgacatgacgcctaagtcgaagttgggaatg
gccccaaacaaatttttcatggtgattccttttataagaccactgcgtgactggcttcat
agaaagtttggtgactcctcagatagtgataatggatttgcctccgctggaagcaccccg
tccaaaccaaacgctgaaaaatcaaagtccaaagtgtgctgcatttcacagttctctgaa
ctaaatccaaccgaccaggccataaaaaacaagcagccgcaaaagccatgcagtcatctc
aacactgcagaaatgtcagaaatgctaaagaacaagaattcaaaccttaggaacaatgga
aagaagcagcaccaagactctccaaacccgaagaagaaagcaaatggcgcccaaaatcag
caagtgaagcagcagattagtattttgaaatcagaacggaagctcaaccctagaagactt
aatgacacctttggagcagactctgcacttgacatgtgttatcccagtgatgagcagcag
tgcaactctgaagaggctcctgacacttgccatgatacttaccagtgctctttctcttca
cgagctttcctgaactttcactttgatcgtgatgccatcatgaaatcactggatatgtaa
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