Xenopus laevis (African clawed frog): 733282
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Entry
733282 CDS
T01010
Symbol
rbm17.L, rbm17
Name
(RefSeq) RNA binding motif protein 17 L homeolog
KO
K12840
splicing factor 45
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
733282 (rbm17.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
733282 (rbm17.L)
Spliceosome [BR:
xla03041
]
Complex A
U2 snRNP components
U2 related factors
733282 (rbm17.L)
Complex B
733282 (rbm17.L)
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GFIT
Motif
Pfam:
G-patch
RRM_1
RRM_MUD2_C
DUF8489
Motif
Other DBs
NCBI-GeneID:
733282
NCBI-ProteinID:
NP_001089093
Xenbase:
XB-GENE-866271
UniProt:
Q0P3S3
A0A974DEE2
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Position
3L:complement(90198259..90212662)
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AA seq
400 aa
AA seq
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MSLYDDLGVETSDSKTEGWSKNFKLLQSQLQVKKAALTQAKTQRTKQSTVLAPVIDLKRG
SASEERQIVDTPPHVGAGIKQESVHSGFSAAEVLVPLADEYDPMYPNDYEKIVKRQREER
QRQRELERQKEIEDREKRRKDRHEASGFSRRPDPESDEEEDYEREKRKRPMGGAAIAPPT
SLMEKDRESIVPAYDDEPRPRPPMGKAAIPPPMYDEPERPRSPTGPSNSFLANMGGTVAH
KIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDLADKVEAAKKADPNPLTEI
LKTPTKVVLLQNMVGAGEVDEELEGETKEECEKYGKVAKCVIFEIPGAPDEEAVRIFLEF
ERVESAIKAVVDLNGRYFGGRIVKAGFYNLDKFRTLDLGD
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtctttatatgatgatcttggtgtggaaactagtgattcaaagacagaaggatggtca
aaaaacttcaaattattgcaatcccaattgcaagttaaaaaggcagctcttacacaagca
aagacgcagcgaacaaagcagagcacagttcttgctcctgtcattgatcttaagagaggt
agtgcatctgaagaacgccagattgtagacacacccccccatgtgggtgctggaataaag
caggaatctgttcacagtgggttttcagctgctgaagttctggtccccttggcagatgaa
tatgaccccatgtaccctaatgactatgaaaaaatagttaaacgtcagagagaggagagg
caacgtcagcgggaactggaaagacagaaagaaatagaagaccgggaaaagagacgtaag
gacaggcatgaagctagtggattttctcgtagacctgacccagagtctgacgaagaggaa
gattatgaaagagaaaagagaaaaagaccaatgggaggagcagccatcgcaccacctaca
tcccttatggaaaaggacagggaatctattgtgcctgcttatgatgatgagccaaggcca
cgaccaccaatgggaaaggcagcaattccaccacctatgtatgatgagccagagagacca
agatcaccaactgggcccagcaattcttttcttgcaaatatgggtggcactgtagcccac
aaaatcatgcaaaagtatggcttccgggaaggacagggcctgggcaaacacgagcaaggg
ctaagcactgcactttctgttgaaaagacaagcaaaaggggaggaaaaattatcgttggt
gacttggctgacaaagttgaagcagctaagaaagcagatccaaaccctctgacggaaata
ctgaagactcccactaaagtcgttttgcttcagaacatggtaggtgcaggggaagtcgac
gaagaactggaaggtgaaacaaaggaagagtgtgaaaaatatggcaaagttgcaaaatgt
gtcatttttgagattcctggtgcaccagatgaagaggctgtaagaatatttttggaattt
gaacgggtcgaatctgcaattaaagctgtggtggatctaaatgggagatattttggtggc
cgaatagtaaaggctggtttctacaacctcgacaaattcagaaccctggatcttggggac
taa
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