Xenopus laevis (African clawed frog): 733423
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Entry
733423 CDS
T01010
Symbol
acin1.L
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03013
Nucleocytoplasmic transport
xla03015
mRNA surveillance pathway
xla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
733423 (acin1.L)
09122 Translation
03013 Nucleocytoplasmic transport
733423 (acin1.L)
03015 mRNA surveillance pathway
733423 (acin1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
733423 (acin1.L)
03041 Spliceosome [BR:
xla03041
]
733423 (acin1.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
733423 (acin1.L)
Spliceosome [BR:
xla03041
]
Complex C
Other components
EJC/TREX
733423 (acin1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
733423
NCBI-ProteinID:
XP_018115062
Xenbase:
XB-GENE-17339494
UniProt:
A0A1L8HYU4
A0A974E0E0
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All DBs
Position
1L:complement(151543954..151596679)
Genome browser
AA seq
2076 aa
AA seq
DB search
MAELEDVTLDGRPLDSLRVTDLRAALEERGLAKSGQKNALIKRLKGALMLESLQKQSTPH
AGFQPNSQMGEEMGQNSFIKQYLEKQQELLRQRLQKEAREAAETAEPLAESEDENIPTDM
VPEPPDLIRSVMKIPEEGLQKRTPKKCQPVLEEPEDSEEELPRKRERRSPRVKQAKTLKP
LVLAQPLQEQEPRRVSTRVRRSKGDANTLKDEAEDVGEEEEEMEEDQEMKLDEETPKRRR
SSSRTVTPQATKSPGPNRSPSPSGLTEKRCRTLSAEAEQVPEERVPPLLPLEGIQQQISE
KHTSPESEKPASPKFLQIDRSYKSPQKWGRQAREKMERGLEPDAQKYQESSFVIRKTSSW
SQETEKLRIKHQELKLNEENEGELKPLFITKSPTSKDIKTSPALVLIKPPSQGRSDRKTT
VGDHSIQIVEKSSGRGVQAMSVLEKQEPTTNKIIKEDIKSLQISICPDTERLPETEKKVT
DIESPESEKSLAISSLGAPPLTKMRKLKIKTHDHSQHDIAKIRYAHSHAKLEKVTPELSK
ESSEIIVCRDVPFVPQVKECEQQSEHKTATPHQKEKMENTSLINQQVDNRETAEHLEREE
SMETEEHVNTKEHVERGEDSSYSISDQEKLVEKTEIGSTCLSVLEIAKEHSLPDGATKEE
EPVSIELNAANPPTALRSDSNISLEIQETSVLKTEEEVPQSIQEDISVALIENTKEQEQA
SLETVKEIVSEGTSETVLCVTSTTLLPHDKFVCTEDQLSAGYEQEKDTPILVSPKENVAV
EEALEQPHNIPGCVEEVTPLKTPETHLEMEEKDLALINNEDSKEIIPELTVLQSTTESVT
NVNTDSVDQDIFDTPIIQDTSELEATEGKNTSFIQDKTDITAVIGNVPHESEPAADDEPT
IHASLENIRDEEPTTVLSPNESSMAVQETTNSALQQHTVTVVMEESPIKLQDDHVSDLVV
KESGCPTNNENSEMMASEMLTDNQKPSETVQLEESASLITQESNELENGKTTNEANNDSQ
KIEKMEDVLEDSKAAFSVMEEPNIIDSDSLPQSTNQEESIDKPTVSTTIDKESTELTDCT
KVVQVDQPFSVEFVEKLEDNIASESECLSVTPIEITPTSPPEKLEPECLSVTPMETTPTS
PLEKLEPECLSVTPMETTQISPLEKLEPECLSVTPMEMTPTSPLEKLEPECLSVTPMEKT
PTAPLEKLEPECLSVTPMEKTPTSPLEKLEPECLSVTPMEKTPTSPLEKLEPSPEKNENE
TVRFPHSEMHSTEEAVEKQDDAARATEEPSLNTDTGDLIDENKEISSNKQLKHDPHEDEP
VVPVRSSPRRRTSSSSSSSSSSSSSSRSSSSSSERSSHSRHSSHSKSSSLDRYSRRSRSS
SASSSKSRSSSCHSDEVATKMVSPEIKNSPDHRPPRSPSPPHQQSSEPPQSSSPPPSSTP
VKLQEDIISPLQNTLQPGRGVRRQLHSDSEDPDLQEQTKRIRLEQESEDRDSKSPVPMEQ
EVEEEQSPESPEVGSGTPESEDVVMEASECQPEGETREAAPPQSSEDCCEGDDKKESTTP
PRTFKRKISVISAGKCSIQPSSSTTTNSDNEAAHPARRRRWGASTATTQKKPSISISTES
LKNLIPEIKEIKQEAVVDLHAEDTHISEDEAERNGDDNSHDKGLKICRTVTQVVPAEIKE
NGQEEGEVREDEAENAAEPEVGPVPVETEVALPSEPEVKKPPEESPARAEVRVTLGDTLL
RRSISQQKSGVSVTIDDPVRTASQLPSPPRNKISCIVHICNLVRPFTLGQLKELLSRSGT
IVEENFWIDKIKSHCYVTYSTTEEAVATRNSLHGVKWPQSNPKFLSVDFAEQDELDFHRG
LLVERPPEPKPEEQPHPHPHIPALRGEHREHERGAREQWAEREREMERRERTRSEREWDR
DKIREGPRSRSRDRRRKEHAKSKEKKNEKKEKVQEEPPAKLLDDLFHKTKAAPCIYWLPL
TEDQILKKVADRAERAKEREKRRKEQEEQEEEERKERAKEREKEAERNRERAREADREKR
REHSRERPRERERRETKRHSRSRSRSTPVRDRGGRR
NT seq
6231 nt
NT seq
+upstream
nt +downstream
nt
atggcagagctcgaagacgtaacgctggacggaaggccgctggacagcctacgggtcacc
gatttgagagccgcgttagaagaacggggactggccaaaagcggccaaaaaaacgcactt
attaagcgtcttaaaggggcattgatgctggaaagtctacagaaacaatctactccccat
gctggttttcagccaaattcacagatgggggaggagatgggacaaaacagctttattaaa
cagtatctagagaagcaacaagagttacttcgacagagactacagaaggaagcaagagaa
gctgcagaaactgcagagcctttagcagaatctgaagatgagaacatacccacggacatg
gttccagagccacctgatctaatccgctctgttatgaagattccagaagaagggctgcaa
aagcgcacaccaaaaaaatgtcagccagttttggaagagcctgaggattcagaggaagag
cttcctcgaaaaagagagagaagatcaccacgggtaaagcaggccaaaactttgaagccc
ttggtgctggcgcagccattacaggagcaggagccacggagggtatctacacgtgtgcgg
cggtctaaaggtgatgcaaatactttaaaagatgaagcagaagatgtgggggaagaggaa
gaagagatggaagaagatcaagagatgaaacttgatgaagaaactcccaagagaagaagg
tcatcttcaaggacagtcactcctcaagccacaaagtcaccaggaccaaatcgttcacct
tctccgtctgggttgacagaaaagaggtgcagaacactatcagctgaggcagaacaagtg
cctgaggagagggttccaccattgctgcctttagaaggcatacagcaacagatttctgag
aagcatacatctccagaatctgaaaaaccagcatccccaaaatttctgcaaatagacagg
agttacaagtctcctcagaagtgggggcgtcaagctagggagaagatggaacgaggttta
gagccagatgcacaaaaatatcaggaatcttcatttgttattagaaaaacatcaagctgg
agccaggaaacagaaaagcttagaattaaacatcaagagctcaagttgaatgaggagaat
gaaggagaactcaaacctttatttataacaaaaagtccaacatcaaaggatataaaaaca
agccctgcactggttttaattaagcctccttctcaaggaaggtcagacagaaagacaaca
gtgggagatcacagcattcaaatagtggaaaagtcatcaggaagaggtgttcaagccatg
tctgtattagaaaaacaagagccaaccacaaataaaattatcaaagaagacatcaaatct
ttgcaaatatccatttgccccgatactgaaagattacctgaaacagagaagaaagtaaca
gatattgaatctcctgaatcagaaaagtcactagcaatttcctccttgggtgcacctccc
ttaaccaaaatgagaaaactgaaaattaagacacatgatcattcacaacatgatatagcg
aaaataagatatgcacatagccatgccaaattggaaaaggtgacaccagagttaagtaaa
gaatcaagtgaaattattgtatgcagagatgtaccatttgtgcctcaagtaaaggaatgt
gagcaacaatcagagcataaaactgcaacaccccatcaaaaagaaaagatggaaaacaca
tctttgataaatcagcaggtagataatagggagactgcagagcatttagagagagaggaa
agtatggagaccgaggaacatgtgaatacaaaagaacacgtggaaagaggagaagactcc
agttatagtatttctgatcaagaaaagctggtggaaaaaacagaaattggttccacttgt
ttatctgttttagagatagcaaaggaacatagcctccctgatggtgctacgaaagaagaa
gaacctgtttccattgaattgaatgcagcaaacccccctacagctctaagaagtgattct
aacatatcattggagattcaggaaacttcagtattaaagactgaagaagaagtgccacaa
agcattcaagaagatattagtgtagcgctaatagaaaataccaaagaacaggaacaagca
tctttggagacagtgaaggaaattgtttctgaagggacatctgaaacagttttatgtgtc
acatcaactacattacttccacatgacaaatttgtatgtacagaagatcaactatctgca
ggatatgagcaagaaaaagatactcctattttggtgtccccaaaagagaatgttgcagta
gaggaagctttggaacaaccacataacattcctggatgtgtagaggaagtaacaccttta
aaaactccagaaacgcatttagaaatggaagaaaaagaccttgctctaataaataatgaa
gattcgaaagaaattattccagaacttactgttcttcaatctacaactgaatctgtgact
aatgttaatacagattctgtggatcaggacatttttgatacacctataattcaagatacc
tctgaactagaagcaacagaaggaaaaaatacttcttttatccaagataaaactgatatt
acagcagtgatcggaaatgttcctcatgaatcagagcctgctgctgatgatgaaccaaca
atccatgccagcttggaaaatatcagagatgaagaacctacaacagtgttgtcacctaat
gaaagttctatggcggttcaagaaaccaccaattcagcattacaacagcatacagtaact
gtagtaatggaagaatcccccataaagttacaggatgatcatgtttcagacctagtggta
aaagagagtggttgtcccacgaacaatgaaaattctgaaatgatggcctcagagatgttg
actgacaatcagaaaccttctgaaactgtgcaattagaagagagtgcctcattaattaca
caggaaagtaatgaattagaaaatggcaaaactaccaatgaagccaataatgattctcaa
aaaatagagaagatggaagatgtgttggaagatagcaaggctgctttttcagttatggaa
gagccaaacataatagattcagacagcttgccacaatccacaaatcaagaggaaagcata
gacaaacctacagtaagcacaactattgacaaggaaagcacagagcttacagattgcaca
aaagttgtacaggtagatcagccatttagtgtagaatttgtagaaaaattggaagacaat
attgcctctgaatcagaatgcctatctgtaactcccatagaaataacaccaacttctccc
cctgagaaattagaaccagaatgcctatctgtaactcccatggaaacgacaccaacttct
ccccttgagaagttagaaccagaatgcctatctgtaactcccatggaaactacacaaatt
tctccccttgagaaattagaaccagaatgcctatctgtgactcccatggaaatgacacca
acttctccccttgagaaattagaaccagaatgcctatctgtaactcccatggaaaagaca
ccaaccgctccccttgagaaattagaaccagaatgcctatctgtaactcccatggaaaag
acaccaacctctccccttgagaaattagaaccagaatgcctatctgtaactcccatggaa
aagacaccaacctctccccttgagaaattagaacccagccctgaaaaaaatgaaaacgag
actgttcgattccctcactccgaaatgcacagcacagaagaagctgtagaaaaacaagac
gatgcagcacgtgcaacagaagaaccttcattaaatacagacacaggtgatttaattgat
gaaaacaaagaaatttccagtaacaaacaactaaagcatgatccacatgaggatgaacca
gtggttcctgtcaggagttcaccacgaagaagaacctcctcatcatcatcatcgtcctca
tcttcttcctcatcctctcgctcatcaagctcttcttcagagagatcatcccattcaaga
catagctcccattctaagtcatcgtctctagatcggtacagccggaggtctagatcttcg
tctgcctcttcatctaagtcaagatcttcttcttgccacagtgacgaggtggcaacaaaa
atggtaagcccagaaataaagaattctcctgatcatcggcctcctaggagcccatcccct
cctcatcagcagtcatctgaacccccgcagagcagctctccacctccttcatctacacca
gtgaagctgcaggaagacataatatcccctttacaaaatactctccaaccaggtcgtggg
gtgcgtcggcagttgcattcagattcagaagacccagacttgcaggaacaaactaaacga
ataagattggagcaagaatctgaggaccgggactctaaaagtccagtccccatggagcag
gaggtggaagaggagcaaagtccagaaagtccagaagtcggcagtggcacaccagagagc
gaggacgtggtgatggaggcttcagagtgtcaaccagagggtgagacccgagaggctgca
cccccacagtcctcagaggattgctgtgaaggagatgacaaaaaagagagtactactcca
ccaagaacattcaaacggaagatctcggttatatctgctggtaaatgctctattcagcct
tcatcatccactacaacgaacagcgacaatgaggctgctcatccagcaagacggaggcgc
tggggggccagtacagcaacaacccagaaaaaaccctcaataagcatctccactgaatca
cttaagaacctaatcccagagattaaggagataaagcaagaggcagtggtggaccttcat
gctgaagacactcacatttctgaagacgaggcagagagaaatggagatgacaattcccat
gacaaaggcctcaaaatttgcagaacggttacacaggtggtaccagcagagattaaagag
aatggacaagaggaaggagaagtgagagaagatgaggcagaaaatgctgctgaacctgaa
gtgggtcctgttccagtggagactgaggtagctcttcctagtgaaccagaagtcaagaag
ccccctgaagaaagtcctgcaagagcagaggttagagtaactttgggagatacactctta
aggcgttcaatcagtcagcaaaagagtggtgtttctgttactatagatgaccctgtccga
acagcatctcagcttccttctcccccacgcaacaaaattagctgtatcgtgcatatctgt
aatctggtcagacctttcactttgggacaactgaaggagttgctttctcgttcaggaact
atagtagaggaaaacttctggatagacaaaatcaaatcgcactgctatgtcacgtattcc
acaacagaagaagctgttgcaactaggaactctcttcatggtgtaaaatggccgcagtcc
aatccaaaatttctctccgttgactttgctgagcaagatgagctggatttccatcggggt
cttttggtcgagcgcccgccagagccaaaaccagaggaacaacctcatccccacccccac
atccctgctttgcgaggtgagcacagagagcacgaacgaggagctagagagcagtgggca
gagagagagcgagagatggaaagaagagaacgcacacgttcagagagagagtgggataga
gataagatccgggaaggacccagatcacgctctcgagaccgtaggaggaaagaacacgca
aagtccaaggagaagaagaacgaaaagaaagagaaagtacaagaagaacccccagcaaaa
ctcttggatgatttatttcacaaaaccaaagctgccccttgtatatattggctcccactc
actgaagaccagattctgaaaaaagttgcagatagggcagagcgtgccaaggagcgagag
aagcggaggaaagagcaagaggagcaagaagaggaggagagaaaagagagagcaaaggag
agggaaaaagaggctgaaagaaatagagagagagcacgagaggctgatagagaaaaaaga
agagagcacagtagagagcgcccacgtgaaagagagcggcgggaaactaagaggcacagc
cgtagtcgcagtagaagtacaccagtgagagacagaggaggccggcgctga
DBGET
integrated database retrieval system
