Xenopus laevis (African clawed frog): 734174
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Entry
734174 CDS
T01010
Symbol
sox1.S, XlSox1, xSox1
Name
(RefSeq) transcription factor Sox-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
734174 (sox1.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
734174 (sox1.S)
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GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
734174
NCBI-ProteinID:
NP_001089143
Xenbase:
XB-GENE-1018276
UniProt:
Q2PG84
A0ABD8DK04
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Position
2S:complement(107239335..107242075)
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AA seq
393 aa
AA seq
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MYSMMMETDLHSPGVQPPNNTGQGGGNKASQDRVKRPMNAFMVWSRGQRRKMAQENPKMH
NSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLLKKDKYSL
AGGLLHAAGGGHMGVGLSPGGGGGGCGGAGGMVVQRMESPGSGASTGGYAHMNGWANGAY
PGSVAAAAAAAMMQEAQLAYSQQQQQHPGSGGHHPHHHPHHPHHHPHHHPHHNPTSHPTP
PQPMHRYDMSALQYSPLPGAQTYMSASPSSYGALSYSSSQQQHQGSPSSAAVAAAAAAAS
SGALGVLGSLVKSEPSVSPPVSGGGSHNRPPCPGDLREMISMYLPGGGEAGDPAAAAAAA
AAAAAATSRLHSLPQHYQGTGTGITSTMPLTHI
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagacggacttacactcccccggggtgcagccccctaacaat
acagggcaaggcgggggcaataaagccagtcaggaccgggtcaagcgacccatgaacgcc
tttatggtttggtccagaggccagaggaggaagatggcccaggagaaccccaagatgcac
aactcggagatcagcaagaggctaggggccgagtggaaagttatgtcggaggctgagaag
agacccttcattgacgaggccaagagactgcgcgccctgcacatgaaggaacacccggat
tataaataccggccgaggcgaaaaaccaagaccctgctgaagaaggacaagtactctcta
gctggggggctgctgcacgcggccggaggaggccacatgggggtcggcctgagtccaggt
ggaggcggaggaggatgtgggggagcgggagggatggtggtacaacgcatggaaagtccc
ggctcaggagcttctacgggcggatacgctcatatgaacggctgggccaatggcgcttac
ccgggctctgtagccgctgctgccgcggctgccatgatgcaagaagctcaacttgcctac
agtcaacagcagcaacagcaccctggcagcgggggacaccacccgcaccatcatccccac
caccctcaccatcacccgcatcaccacccgcaccacaaccccacgtcacacccgacgccg
ccccagcccatgcaccgttacgacatgagcgccctccagtacagcccgctgcccggagcc
cagacctatatgagcgcatctccctccagctacggggctctgagctacagctccagccaa
cagcagcaccagggctctccgtcctcagccgcagtggcggcggctgcagctgccgcttca
tcaggtgccctaggggtactgggatccctggtcaaatccgaacccagtgtcagtccccca
gtgagtggaggaggctcccacaaccggccgccctgccccggagatctacgagagatgatc
agcatgtacttgcctggtgggggggaagccggggatccggcagctgctgcggcagcggca
gcagcagcagcagcagcaactagcagacttcacagcctaccccaacactaccaggggaca
ggtacggggataaccagcaccatgccactgacacacatctga
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