Xenopus laevis (African clawed frog): 734219
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Entry
734219 CDS
T01010
Symbol
sdc4.L, amphiglycan, ryudocan, sdc4, sdc4-a, sdc4-b, syn-4, syn4, syndecan-4, Syndecan4
Name
(RefSeq) syndecan 4-B precursor
KO
K16338
syndecan 4
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04512
ECM-receptor interaction
xla04514
Cell adhesion molecule (CAM) interaction
xla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
734219 (sdc4.L)
04514 Cell adhesion molecule (CAM) interaction
734219 (sdc4.L)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
734219 (sdc4.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xla00535
]
734219 (sdc4.L)
Proteoglycans [BR:
xla00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
734219 (sdc4.L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
YL1
Motif
Other DBs
NCBI-GeneID:
734219
NCBI-ProteinID:
NP_001089177
Xenbase:
XB-GENE-6251681
UniProt:
Q1AGV6
A0ABD8CVU0
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All DBs
Position
9_10L:complement(3891770..3909408)
Genome browser
AA seq
205 aa
AA seq
DB search
MNRLLLLLALVLSGVAAESIRETETMDPTSMLEYESSGSFTDEVFVDEDDDDDYEDGVDY
EIDSESDNDEDYSGSGDDDFDDEDNVEDEDEEETTTLGNQIPEHDFDETKTGRKFDTFNE
NNEIDNDIRHPAKPKTLEPSNEIPMASIGSSGFFQRTEVIVAIIAGTLVGLVVAVSFIVF
LVIRRNQNGDLVKKPIYKKTSTMEV
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcctcctgctgcttttagcgctggttctgtccggagtcgcagccgagtcgata
agagagaccgagacaatggaccccacgagtatgcttgagtatgaatcttccggttctttc
actgatgaggtctttgttgatgaggatgatgatgatgattatgaagacggcgttgactat
gaaatcgactctgaatctgataatgatgaagattactctggttcaggtgatgacgatttt
gacgatgaagataatgttgaagatgaagacgaggaggaaacgaccactttgggcaaccag
attcctgaacatgattttgacgaaaccaaaactggtaggaaatttgacacattcaacgag
aacaacgagattgacaatgatatccggcaccctgctaagcccaaaacattggagccatcc
aatgaaatccctatggccagcattgggtcttcaggattcttccagagaacagaagttatt
gttgcaatcattgccggcacgttggttggcctggtcgttgcagtttccttcattgtattc
ttagtaatacggagaaaccaaaacggggatctggtgaagaaacccatctacaagaaaact
tcgacaatggaagtatag
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