Xenopus laevis (African clawed frog): 734253
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Entry
734253 CDS
T01010
Symbol
supt4h1.L, supt4h1
Name
(RefSeq) transcription elongation factor SPT4
KO
K15171
transcription elongation factor SPT4
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
734253 (supt4h1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
734253 (supt4h1.L)
03019 Messenger RNA biogenesis [BR:
xla03019
]
734253 (supt4h1.L)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
734253 (supt4h1.L)
RNA polymerase I system
734253 (supt4h1.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
734253 (supt4h1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
734253
NCBI-ProteinID:
NP_001089206
Xenbase:
XB-GENE-977396
UniProt:
Q5HZ97
A0A974DGW1
LinkDB
All DBs
Position
2L:43151705..43159931
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AA seq
117 aa
AA seq
DB search
MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI
VAMMSPDDSWVSKWQRITNFKPGVYAVSVTGRLPQGIVRELKSRGVVYKSRDTAIKT
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggagactgtacccaaagacctgaggcatctgagggcttgtttgttgtgctct
ttagtgaagacgattgaccagtttgagtatgatggctgtgacaattgtgatgcctatctg
cagatgaaggggaatcgggagatggtttatgattgcacaagttcctcgtttgatgggatt
gtggccatgatgagtccagatgacagctgggtatctaaatggcagagaataacaaacttt
aaaccaggtgtgtatgcagtgtctgtcacagggcgtcttccgcaaggaattgtacgagag
ttaaagagccgtggcgtggtatataaatccagagacactgccatcaagacgtga
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