Xenopus laevis (African clawed frog): 734309
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Entry
734309 CDS
T01010
Symbol
noct.S, ccr4l, ccrn4l, ccrn4l-b, noc, noct
Name
(RefSeq) nocturnin S homeolog
KO
K18764
nocturnin [EC:
3.1.3.108
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
734309 (noct.S)
Enzymes [BR:
xla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.108 nocturnin
734309 (noct.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
734309 (noct.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
734309
NCBI-ProteinID:
NP_001089262
Xenbase:
XB-GENE-1014547
UniProt:
Q5FWL2
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All DBs
Position
1S:49629777..49654969
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AA seq
459 aa
AA seq
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MYQGPASRLFSALGDVLVPCASSLRQHSPVRRRALPTPGQGPVFGLSCCHSLAGWIGEAP
AAAGGGHNCSAAAAASATTGTAARAASRTVCSMGNSTSRLYSALAKTLSSSTTVSQHQEL
LETSEHDQCDPIDPKELLEECQVALQERPARVQRDFLSLRNDSSSQQPRTFRVMQWNILA
QALGEGKDNFIMCPMEALKWEERKYLILEEILMYQPDVLCLQEVDHYFDTFQPILSRLGY
QCTFLAKPWSPCLDVEHNNGPDGCALFFLQDRFQLVNSSKIRLSARTLKTNQVAIAETLQ
CCETGRLLCFAVTHLKARTGWERFRLAQGTDLLHNLESITQGATVPLIICGDFNAEPTEE
VYKRFASSSLNLNSAYKLLSEDGESEPPYTTWKIRPTGESCHTLDYIWYSQHALRVNNAL
GLPTEEQIGPNRLPSFNYPSDHLSLVCDFSFNEDPARLL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaaggcccggcgagcagactgttttcggcgctaggagacgtgctagttccgtgc
gcatcttctctgcgccaacactcgccagtcaggaggagagcccttccgactccaggacag
gggcccgtgtttggcctcagctgctgccacagtcttgccggctggatcggagaagcccca
gcagcagcaggaggaggacacaactgttccgcagcggcagccgcaagtgcgacaacaggg
acagcggccagagctgcctctagaactgtgtgttccatgggaaacagcaccagccggctg
tacagcgctctcgccaagacgcttagcagtagtactactgtgtcccagcaccaggagtta
ttagaaacctctgagcatgaccagtgtgatccaattgatcccaaggagcttctggaagag
tgccaagtggccctgcaagagcgtccggcccgcgtccaaagagacttcttgagcctaagg
aatgactctagtagccagcagccacggacgtttagagtgatgcagtggaacattctggca
caagctcttggtgaaggcaaagataactttataatgtgccctatggaggccttgaagtgg
gaggaaagaaaatacttgatccttgaggaaatcctgatgtaccaacctgatgtattgtgc
ctccaggaggtagatcactactttgataccttccagcctatactgagcagattgggctac
cagtgcactttcttagccaaaccatggtctccttgtcttgatgtggagcacaacaatgga
cccgatggctgtgccttgttcttcctgcaggatagattccaactggttaacagttccaaa
atcaggctgtcagccagaactttaaaaaccaaccaggtggccattgctgagaccctgcag
tgttgtgaaactggaaggctactgtgctttgcggtcactcatctaaaggcacggacagga
tgggagaggtttcggctggcacaaggcactgacctgctacacaacctagaatcaattacc
cagggtgccacagttccacttattatttgtggagacttcaatgcagagcctacagaagaa
gtatacaaaagatttgcctcctccagcttgaacctcaacagcgcttacaagttactgagt
gaagacggagaatccgaaccaccctacactacgtggaagatccgccccacaggagagtca
tgccacactctggattacatctggtactcccagcatgccctgagggtaaataacgcttta
ggtctgccaacagaagagcagattgggcccaacaggctcccttctttcaattatccctcc
gatcacctgtcgttagtctgtgactttagttttaacgaagacccagccagattattataa
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