Xenopus laevis (African clawed frog): 734364
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Entry
734364 CDS
T01010
Symbol
alyref.L, ALY, alyref, alyref-a, Tho4-A, thoc4, thoc4-a
Name
(RefSeq) THO complex subunit 4-A
KO
K12881
THO complex subunit 4
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03013
Nucleocytoplasmic transport
xla03015
mRNA surveillance pathway
xla03040
Spliceosome
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
734364 (alyref.L)
09122 Translation
03013 Nucleocytoplasmic transport
734364 (alyref.L)
03015 mRNA surveillance pathway
734364 (alyref.L)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
734364 (alyref.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
734364 (alyref.L)
03041 Spliceosome [BR:
xla03041
]
734364 (alyref.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
734364 (alyref.L)
TREX complex
734364 (alyref.L)
Spliceosome [BR:
xla03041
]
Complex C
Other components
EJC/TREX
734364 (alyref.L)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
734364 (alyref.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
734364
NCBI-ProteinID:
NP_001089314
Xenbase:
XB-GENE-973560
UniProt:
Q58EA2
A0A974BXD2
LinkDB
All DBs
Position
9_10L:28888991..28894131
Genome browser
AA seq
256 aa
AA seq
DB search
MGDKMDMSLDDIIKLNRSQRPSGRGRGGGRGARGGSARGGAGGRIGGGRGGGAPGVGGPM
RSRPVLSRGGRNRPTPYSRPKQLPDKWQHDLFDSGFGAGAGMETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIEAQRRPIQSQSRGGGVTRPRGGTLGFASGNRRGRGGNRGRGRGAGRNPKQQLSAE
ELDAQLDAYNARMDTS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgggggacaaaatggacatgtctcttgatgatatcatcaagcttaatcggagtcaaaga
ccatccggcagaggccggggtggaggacggggtgctcggggcggatcggcccgcggtgga
gcaggaggccgaattggcggaggccgtggtggaggagcgccgggagtcggagggccgatg
cggtcaaggcctgtcctgagccgaggcggtaggaaccggcctacaccgtacagcaggccg
aaacagcttccagacaagtggcaacatgatcttttcgacagtggcttcggcgcaggagct
ggtatggagaccggaggaaagcttctagtgtcaaatctcgactttggtgtttctgatgca
gatattcaggagctctttgcagagttcggaactttaaagaaggcagcggtacattatgac
cggtctggccgaagcttgggcactgcggatgtgcactttgaaaggaaagcagacgctctt
aaagcaatgaagcagtataacggggtgcccctggatggtcggcccatgaacattcagttg
gtcacatcacagatagaagcacagagaagacccatacagagccaaagtaggggtggtggt
gtcactcgcccacgaggaggaactttaggctttgcaagtggaaacagacgtggtagaggg
ggaaaccggggtcgtggaaggggggctggaaggaatccaaaacagcagctgtccgcagaa
gagttggatgcacagcttgatgcttacaatgcacggatggacaccagctaa
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integrated database retrieval system
