KEGG   Xenopus laevis (African clawed frog): 734413
Entry
734413            CDS       T01010                                 
Symbol
larp1.L, larp1
Name
(RefSeq) La ribonucleoprotein domain family member 1 L homeolog
  KO
K18757  la-related protein 1
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    734413 (larp1.L)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     734413 (larp1.L)
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 734413
NCBI-ProteinID: NP_001089363
Xenbase: XB-GENE-6039438
UniProt: Q566K4 A0A974DCQ2
LinkDB
Position
3L:complement(28127591..28174388)
AA seq 1021 aa
MAAQVEAPLLPATPLPPPLQQPLGEMIEDRRLEGGKQRPAKEDDGSGGEEAPFRKEFVEA
PPPKVNPWMKAGGSTVNGQLPVDPPVPAKVVKAGNPRPRRGSKVGDFGDATNWPTPGEIA
HKSVQPSSKLQPSRKSLGKKEMKEESADGKENQRVKSDESSEEKNGDDDCQRSANKKKAF
PAGNKHKWVPLQIEMKPDGPREKTASRNNRQNDQQRHPLNRSDPKTMYPDNKADWQDFDD
TSSVKSEGAVRGGYRGRGRGRGRGRGRGRGGTRSQFDYQYGYRKFDGTDGTRGPKLNIAS
NITYYYDNMSSSELYSVDQELLKDYIKRQIEYYFSVDNLQRDFFLRRKMDNEGFLPVALI
AGFHRVQALTTDIELIIKALKDSKVVEIIDGKIRRKEQPDMWPLPGPSLSDASQTDFSQL
INCPEFIPRQGFQKETESAPGSPRSSSPSRTTKSEEVSNLKTMPKGLSASLPDLDSDTWI
EVKKRPRPSPARTKKPDEVKSPQVVTPSQVTPQKPPKEQDEPEELDFMFDEEMEQMDGRK
NTFTDWSDEDSDYEIDDRDVNKILIVTQTPPSLRKHPGGDRTGNHTSRAKMSSELVKVIN
DGLFYYEQDLWTEQFEPEYSQIKQEVENFKKVNMISREQFDTLTPEPPVDPNQEVPPGPP
RFQQVPTDDLANKLFGVPEPSTIARSLPTTVPESPNYRNARTPRTPRTPRLKDPTLTPRF
YPVVKEGRTIDAKTPRKRKTRHSSNPPMECHVGWVMDSREHRPRTASVSSFSSNASPSEG
APALSNFGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTL
FRFWSFFLRDHFNKKMYEEFRQLAVEDSKEGYRYGLECLFRYYSYGLEKKFRVDIFRDFQ
EETRRDYETGQLYGLEKFWAFLKYSKAKNLDIDPTLQDCLSKFRRLEDFRVDPPMGEDGG
SKRRHSFSTGEGRRRYPSQSSSRGSGHPSQNSTQNSAKEEAKAQSQPSTAAPDSQFPGGG
K
NT seq 3066 nt   +upstreamnt  +downstreamnt
atggcggctcaggtggaggctccgctgctacccgcgaccccgctgccgccgcccctacag
cagccgcttggggagatgatagaggataggcggctggagggagggaagcagcgcccggcc
aaagaggacgacggcagcggaggcgaggaagcgccgtttcgtaaggagtttgtagaggct
cccccacccaaggtgaacccctggatgaaggctggcgggagtaccgtaaatgggcagctg
cccgtagaccctcctgttcctgccaaggtggtgaaagctggaaacccaaggccaaggaga
ggaagcaaggttggggattttggtgacgccacaaactggcctaccccaggggaaattgcc
cacaagtctgtgcagccatcaagcaaactccagccaagccgcaaatccctgggcaagaag
gaaatgaaagaagagagtgcagacgggaaggaaaaccagagggtgaaatcggatgagtcc
agtgaggagaagaacggtgatgatgattgccagagatcagcaaacaaaaagaaagcgttt
cccgcaggaaacaaacacaagtgggtacctctacaaatcgagatgaagcctgatggacca
agagagaaaaccgcttccaggaacaaccggcagaacgatcagcaacgacacccactgaac
cgcagtgaccccaaaacgatgtatcctgataacaaggctgattggcaggactttgatgat
acttccagcgtgaaaagtgagggagctgtcaggggtggctataggggcagaggacgtggc
cgagggagaggaagaggacgtggtcgaggaggcacccgttctcaatttgactatcagtac
gggtacaggaaatttgatggaaccgatggaacacgtgggccaaagttaaatatcgctagt
aatatcacgtattactatgacaacatgagtagttcggagctgtacagtgtggaccaggag
cttctgaaagactacatcaaacggcagatagaatactacttcagcgtagacaacctgcag
agggacttcttcctgcgccgcaagatggataacgaaggtttcttgcccgttgctttgatt
gccggtttccacagagtacaggctctcaccactgacattgaactgataatcaaggcacta
aaggacagcaaagtggtggagattattgatgggaaaattcgcaggaaagagcagccagat
atgtggccgcttccaggtccctccctttcagatgcttcccagactgacttctctcaactc
ataaattgtcctgaatttatccccaggcaaggattccagaaggaaacagaatctgctcct
ggctctcctcggtcatccagcccatctcgaacaacaaaatcggaagaggtcagtaacttg
aagaccatgccaaaggggctatcagccagtttgcccgacctggactctgatacttggata
gaagtcaaaaaaaggccgcggccttccccagcaagaaccaagaaaccggatgaagtgaag
tctccacaggtggttacaccttcccaggtgactccacaaaagccacccaaagagcaagat
gaaccagaggagttggactttatgtttgacgaggaaatggagcaaatggacggccgaaag
aatactttcactgactggtcagatgaggactcggactatgagatcgatgatcgagacgtg
aacaagattcttattgtgacgcagactccgccttcactacgcaagcaccctggaggtgac
cgcactggcaaccacacttctcgcgcaaagatgagctcagagttggtcaaagttatcaac
gatggtctgttctattatgagcaggacctgtggactgaacagtttgagccagagtactct
cagattaagcaagaggtggagaactttaaaaaagtgaatatgattagtcgggagcagttt
gacaccttaacccctgagccgccggtggatccaaaccaggaggttccaccaggacccccg
aggtttcagcaagttcctacagatgatttggctaataaactgttcggtgtccctgaacct
tcaacgattgcccgatctctgccgaccaccgttcccgaatctccaaattaccgcaatgct
cgtacaccacgtaccccacgcacacccaggttgaaagatccaactcttacaccaaggttt
tacccagtggttaaagaaggcaggacgatagatgctaagactcctcggaaaagaaaaacg
cgacacagctccaacccgccaatggaatgccacgtagggtgggtgatggactccagggag
cacagacctcgtactgcctctgtcagttctttcagctccaatgccagcccatctgagggt
gccccagccttgagcaatttcggatgtaccccacaatctctgccaaagttccagcatcct
tcccatgaactgttgaaggagaatggatttacacaacatgtttaccacaagtaccgccga
cgttgccttaatgaaaggaaacggctgggcattggccagtctcaggagatgaacaccctc
ttccgtttctggtccttttttctccgagatcatttcaataagaaaatgtatgaggagttc
agacaactggctgtggaggatagcaaagagggatacaggtacgggttggagtgcctattc
agatactacagctacgggctggaaaagaagttccgagttgatatattccgagatttccag
gaagaaactagaagggactacgaaacaggtcagctgtacgggctggagaagttttgggcc
ttcttaaaatattccaaagccaaaaatcttgacatagaccccacattgcaggactgtctg
agcaagttccgcagactagaggatttcagggttgatcctccaatgggagaagatggagga
tcaaagaggcgtcactcattctcaacgggggagggcaggagaaggtacccatcccagtct
tccagtagaggatctggtcatccgtctcagaattcaactcaaaattcagccaaggaagag
gccaaagcccaaagccaaccttccactgctgcaccggattcccagttccctggaggaggg
aagtag

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