Xenopus laevis (African clawed frog): 734481
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Entry
734481 CDS
T01010
Symbol
rad23b.L
Name
(RefSeq) uncharacterized protein LOC734481
KO
K10839
UV excision repair protein RAD23
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03420
Nucleotide excision repair
xla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
734481 (rad23b.L)
09124 Replication and repair
03420 Nucleotide excision repair
734481 (rad23b.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
xla03051
]
734481 (rad23b.L)
03400 DNA repair and recombination proteins [BR:
xla03400
]
734481 (rad23b.L)
Proteasome [BR:
xla03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
734481 (rad23b.L)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
734481 (rad23b.L)
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Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Crinkler
Rad60-SLD_2
UBA_2
DUF1421
UBA_9
Motif
Other DBs
NCBI-GeneID:
734481
NCBI-ProteinID:
NP_001089431
Xenbase:
XB-GENE-17337853
UniProt:
Q505M5
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Position
1L:130490105..130508658
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AA seq
419 aa
AA seq
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MQITLKTLQQQTFKIDIDAEETVKALKEKIELEKGKDAFPVAGQKLIYAGKILNDDIALK
EYKIDEKNFVVVMVTKPKGASCSSAPSPATSQPASAASPAPASPPLTYTPIARQNAPIPL
PVPFSLPTVPTPAAPTSEPSTTTAPEEEKPEEKTVSPPETVSPSSTECSLPTDSSRPSIF
EDATSALVTGQSYENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLMGIPSDREDQA
VAEPPEALSSTPTLTPPLTQPLTQPLPAAAGAAATTTTPSTPSTGGNPLDFLQNQPQFQQ
MRQIIQQNPSLLPALLQQIGRENPSLLQQISQHQEQFIQMLNDPVPEGGREGGGGRGVAA
EAGSGHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFDDD
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcactctgaagacccttcagcagcagacctttaagatagacatcgacgcggag
gagacggtcaaagcactgaaagaaaagattgaactagaaaaagggaaggatgcatttcct
gtcgctggtcaaaagttaatttatgcaggtaaaattctaaatgatgacatagcccttaaa
gagtataaaattgacgagaagaactttgtggtggttatggtgacaaaaccaaaaggtgca
tcatgttcttcggctccatctccagcaacatcccaaccagccagtgctgcatctccagct
ccggcctcacccccccttacatatacaccaattgcccgacaaaacgcccctatacccttg
cctgttcctttctctctacccactgttcctactcctgctgcacctacttctgagccatcc
acaaccactgcacctgaagaagagaaacctgaagagaaaacagtcagtccaccagagaca
gtgagtccctcatcaactgagtgcagtttaccaacggattcttctcggccatctattttc
gaagatgccacaagcgcacttgttacaggtcaatcatatgaaaatatggtaactgaaatt
atgtcaatgggctatgaacgagaacaagtaattgctgcccttagagcaagttttaacaat
ccagacagagcagttgaataccttctgatgggaattcctagtgatcgtgaagatcaggca
gttgcagaacctcccgaagctctcagtagtactcctactcttactccgcctcttactcag
cctcttactcagcctcttccagctgcggcaggtgcagctgcaacgactactacaccatct
acaccttcaacgggaggaaatccccttgatttcttgcagaatcagcctcaatttcagcag
atgaggcagatcattcagcagaatccttccctgctaccagcacttctccaacaaatcggt
cgggagaatccttcactactgcagcaaattagccagcatcaagagcaatttattcagatg
ttaaatgatccagtcccagaaggtggcagggaaggtggaggtgggagaggcgttgcagca
gaggctggaagcggtcatatgaactacatccaagtcacacctcaggaaaaagaagctata
gaaaggctaaaggcactaggattccctgaaggacttgtgatacaggcttattttgcatgc
gagaagaatgagaatttggctgccaacttcctcctacagcaaaactttgacgatgattga
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