KEGG   Xenopus laevis (African clawed frog): 734531
Entry
734531            CDS       T01010                                 
Symbol
atxn2.L, atxn2
Name
(RefSeq) ataxin 2 L homeolog
  KO
K23625  ataxin 2/2L
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    734531 (atxn2.L)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     734531 (atxn2.L)
SSDB
Motif
Pfam: SM-ATX LsmAD LSM
Other DBs
NCBI-GeneID: 734531
NCBI-ProteinID: NP_001089480
Xenbase: XB-GENE-920197
UniProt: Q4V7W4
LinkDB
Position
1L:176955287..177012556
AA seq 630 aa
MSMKQQAGNNRKPGGGSVPAAGGGAGGGRQNMGRGRISGKGPPQSISFDGIYANMRLVHI
LTSVVGSKCEVLVKNGNVYEGVFKTYSPKCDLVLDAAHKKTTESIVGPKREDIVDSILFK
SSDFVMVQFKDMDVNYARRDGFTDSGIACRLNGEHKEKDLEPWDGGESLISSTPTGKDEL
ESLENESNGWDPNEMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEYLKREARAAQIAE
EIESSSQYKARVALENDERSEEEKYTAVQRALNDQERHSLNTRENKYIPPVQRNKDAMLW
TTHSGRQNSARIGQSGSGPIPSRTGSHSSDYNPNAGADQRVVNGGVPWPSPCPSPSSRPP
SRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMS
PKAQRHPRTHRVSNGRGTMCGGLEFVSRNEAGEASVQPVARNSSSGGTWSSVVSGVQRLS
PKTHRPRSPRLGSHAPGSNATSPQPGTVPPESVSMPVPAASPTPASPASDRAVTPSCEAK
DTRLQDQRQNSPAGCRENSKYSESSKTENKAVSPMASEQRKQLDDLKKFKNDFRLQPSSS
PDALDQLPVKSRDSVEKPRDPLKKKNGFKC
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgtccatgaagcagcaggccggtaacaacaggaagcccggcgggggcagcgtcccggct
gctggaggaggagcaggaggaggaaggcagaatatgggcagagggaggatcagtggaaaa
gggccccctcaatcgatctcgtttgatggtatctatgcaaatatgagactggttcatatt
cttacatcagtagttggctcaaaatgtgaggtattggtgaaaaatggaaacgtatatgaa
ggtgtttttaaaacttacagtcctaagtgcgatttggtgcttgatgcagctcataagaaa
actacagaatctattgtggggccaaagcgtgaagacattgtggatagtatattgtttaaa
tcttccgactttgttatggtgcagtttaaagatatggatgtgaattatgcaagacgagat
gggttcacagattctggaattgcttgtaggttaaatggtgaacataaggagaaagatctg
gagccgtgggatggtggtgaaagtctcattagcagcacacctactggcaaagatgagctg
gaatctttggaaaatgagtctaatggatgggatccaaatgaaatgtttcgctacaatgaa
gaaaattatggtgttgtgtcaacttatgacagtagtctgtcttcgtacactgttccatta
gaaagggataattcagaagaatatttgaagagagaagccagagcagctcagattgctgaa
gaaattgaatcaagttcccagtataaagctagagttgccttggaaaatgatgagcgatca
gaggaggaaaaatacacggctgttcaacgagcccttaatgaccaggaaaggcactcactg
aataccagagaaaataagtacattccacctgtgcagagaaataaagatgcaatgttatgg
actactcacagtggaaggcaaaattctgcaaggataggacagtctggatcaggacccatt
ccttcaaggacaggatcacattcttctgactacaaccccaatgctggagctgatcagaga
gttgtaaatggaggtgttccctggccatcgccttgtccatctccttcttcccgcccacct
tctcgctaccagtcaggtcccaactctcttccacctcgggcagccacccctacaaggccg
ccctcaaggcccccttcgcggccatccaggcccccgtctcacccctctgctcatggttct
ccagctcctgtctctactatgcctaaacgcatgtcttcagaaggacctccaaggatgtct
cctaaggcacaacgtcatcctcgtactcacagagtttcaaatggcaggggcacaatgtgt
ggaggattagaatttgtttctcgcaatgaagctggagaagcgtctgtgcaacctgtggcc
cgaaatagttcctcaggtggaacatggtcttctgttgtgagcggagttcaaaggttatcg
ccaaagacacacaggccaaggtctccgcggctaggaagtcatgcaccaggttcaaatgcg
acttcgccccagcctgggacagtgcctccggagtctgtttctatgccagtgcctgccgca
tcccctacacctgctagccctgcatctgatagggctgttactccctcttgtgaagcaaaa
gatacaagactacaagatcagagacaaaattccccagctggttgtagagaaaatagtaaa
tacagcgaatctagcaaaactgaaaacaaagcagtatctccaatggcttctgaacaaagg
aaacagcttgatgatttaaagaaatttaaaaatgattttaggctacagcccagctcaagt
cctgatgctttggatcagttacccgtcaaaagtcgggatagtgtagaaaagccaagggat
ccgttgaagaaaaaaaatggattcaaatgctaa

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