KEGG   Xenopus laevis (African clawed frog): 734559
Entry
734559            CDS       T01010                                 
Symbol
wdr18.S, wdr18
Name
(RefSeq) WD repeat domain 18 S homeolog
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:xla03009]
    734559 (wdr18.S)
Ribosome biogenesis [BR:xla03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    734559 (wdr18.S)
SSDB
Motif
Pfam: WD40 WD40_alt WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_TEP1_C EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 NBCH_WD40 WDR55 WD40_MABP1-WDR62_1st Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_WDR75_2nd Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_NWD2_C Beta-prop_VPS8 Beta-prop_EIPR1 WDR54 PEP5_VPS11_N COG2_N Pep3_Vps18
Other DBs
NCBI-GeneID: 734559
NCBI-ProteinID: NP_001089507
Xenbase: XB-GENE-5818167
UniProt: Q4QR01 A0A974DSZ3
LinkDB
Position
1S:complement(91001263..91009596)
AA seq 428 aa
MAAPLELVLSADATGQVANCTVWEPVTGSVLLTYRGGNTSHRGLAVLGGQYLLGGQLGKN
YINVWELQRRDQLQQKIVCPGPVNCLAASPNGLYLVAGIAESIYLWEVCTGHLLAILNNH
YQDVTCLTFTDDGSHIVSGAKDSLVLVWSLYSALQVETSRGPEPRYVWSRHSLPITDLQC
GIGGPQSRVVTSSLDQTVKLWEICSGDLLVSVLFDVRIMSVAFDPAEYHLFCGGSDGVIY
QVDLYTTPEQRERQFHPEQEMVLKGHRNQVTCLSVSLDGSMLISGSHDETVCVWDIQSKQ
CLRTVPHKGPVTNVFIIAAPSNMLRSESKPSFPLPHFSKHLQGAEGCDGPESGGVILRLG
KQQGSEENTYLQRAEQLQSLLGESEGKNLSGLVEQLRSRTSELEEELNVVRKINKDLFDF
SARIITKQ
NT seq 1287 nt   +upstreamnt  +downstreamnt
atggcggcgcccttagagctagtgcttagcgctgatgctactgggcaagtagcgaactgc
acggtttgggagccggtaaccggttctgtgcttctgacttatagagggggtaacacttcg
caccggggattggcggtactcggtggtcagtacttgctgggcggacagcttggaaagaac
tacatcaatgtgtgggagcttcagagaagggaccagttgcagcagaagattgtatgccca
ggacctgtgaactgcttggctgcttctccaaatggactttacctagtggctggcattgca
gaaagtatttacctttgggaggtctgcactggacacctccttgctatactaaacaatcac
taccaggatgtaacctgcttgacttttacagatgacggcagtcatattgtatctggagcc
aaggacagtttggttctggtgtggagcctttacagtgctttgcaggtagagacttcccga
gggcctgaacctcgttatgtatggtcccgtcacagcttacctatcacagatttgcaatgt
ggtattggaggtccacagtctcgagtagtcacatcttctctagatcagacagtcaagctg
tgggagatttgctcaggtgacctcctggtctctgtgctctttgatgttcggattatgtcg
gtggcatttgatccagctgaatatcatcttttctgtggcggcagtgatggcgttatatac
caagtagacctctacactacgccagagcagagagaacgacaattccatcctgagcaggag
atggtgttaaaaggacacaggaaccaggttacatgcttatcagtgtctctggatgggagc
atgctgatctctggctctcatgatgaaactgtctgtgtttgggacattcaaagcaagcag
tgtctacgtactgtcccccataaaggtcctgtgacaaatgtatttataatagctgctcca
agtaacatgttgcgatcagaaagtaagccgagcttccctctaccacacttcagcaaacac
ctgcagggggctgagggctgtgacggtccggagagtggaggggtgatcctgcgacttggg
aagcagcagggatctgaggagaacacatacctgcagagagcagagcagttacagtccctc
cttggtgaaagtgagggcaagaatctttcaggactagttgaacagcttcgctctagaacc
tcagagctggaagaggaacttaatgtggtacgaaaaatcaacaaggatctctttgacttc
tcagccaggattatcaccaaacaataa

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