Xenopus laevis (African clawed frog): 734559
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Entry
734559 CDS
T01010
Symbol
wdr18.S, wdr18
Name
(RefSeq) WD repeat domain 18 S homeolog
KO
K14829
pre-rRNA-processing protein IPI3
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xla03009
]
734559 (wdr18.S)
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
734559 (wdr18.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_alt
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
NBCH_WD40
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR75_2nd
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_NWD2_C
Beta-prop_VPS8
Beta-prop_EIPR1
WDR54
PEP5_VPS11_N
COG2_N
Pep3_Vps18
Motif
Other DBs
NCBI-GeneID:
734559
NCBI-ProteinID:
NP_001089507
Xenbase:
XB-GENE-5818167
UniProt:
Q4QR01
A0A974DSZ3
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All DBs
Position
1S:complement(91001263..91009596)
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AA seq
428 aa
AA seq
DB search
MAAPLELVLSADATGQVANCTVWEPVTGSVLLTYRGGNTSHRGLAVLGGQYLLGGQLGKN
YINVWELQRRDQLQQKIVCPGPVNCLAASPNGLYLVAGIAESIYLWEVCTGHLLAILNNH
YQDVTCLTFTDDGSHIVSGAKDSLVLVWSLYSALQVETSRGPEPRYVWSRHSLPITDLQC
GIGGPQSRVVTSSLDQTVKLWEICSGDLLVSVLFDVRIMSVAFDPAEYHLFCGGSDGVIY
QVDLYTTPEQRERQFHPEQEMVLKGHRNQVTCLSVSLDGSMLISGSHDETVCVWDIQSKQ
CLRTVPHKGPVTNVFIIAAPSNMLRSESKPSFPLPHFSKHLQGAEGCDGPESGGVILRLG
KQQGSEENTYLQRAEQLQSLLGESEGKNLSGLVEQLRSRTSELEEELNVVRKINKDLFDF
SARIITKQ
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccttagagctagtgcttagcgctgatgctactgggcaagtagcgaactgc
acggtttgggagccggtaaccggttctgtgcttctgacttatagagggggtaacacttcg
caccggggattggcggtactcggtggtcagtacttgctgggcggacagcttggaaagaac
tacatcaatgtgtgggagcttcagagaagggaccagttgcagcagaagattgtatgccca
ggacctgtgaactgcttggctgcttctccaaatggactttacctagtggctggcattgca
gaaagtatttacctttgggaggtctgcactggacacctccttgctatactaaacaatcac
taccaggatgtaacctgcttgacttttacagatgacggcagtcatattgtatctggagcc
aaggacagtttggttctggtgtggagcctttacagtgctttgcaggtagagacttcccga
gggcctgaacctcgttatgtatggtcccgtcacagcttacctatcacagatttgcaatgt
ggtattggaggtccacagtctcgagtagtcacatcttctctagatcagacagtcaagctg
tgggagatttgctcaggtgacctcctggtctctgtgctctttgatgttcggattatgtcg
gtggcatttgatccagctgaatatcatcttttctgtggcggcagtgatggcgttatatac
caagtagacctctacactacgccagagcagagagaacgacaattccatcctgagcaggag
atggtgttaaaaggacacaggaaccaggttacatgcttatcagtgtctctggatgggagc
atgctgatctctggctctcatgatgaaactgtctgtgtttgggacattcaaagcaagcag
tgtctacgtactgtcccccataaaggtcctgtgacaaatgtatttataatagctgctcca
agtaacatgttgcgatcagaaagtaagccgagcttccctctaccacacttcagcaaacac
ctgcagggggctgagggctgtgacggtccggagagtggaggggtgatcctgcgacttggg
aagcagcagggatctgaggagaacacatacctgcagagagcagagcagttacagtccctc
cttggtgaaagtgagggcaagaatctttcaggactagttgaacagcttcgctctagaacc
tcagagctggaagaggaacttaatgtggtacgaaaaatcaacaaggatctctttgacttc
tcagccaggattatcaccaaacaataa
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