Xenopus laevis (African clawed frog): 734636
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Entry
734636 CDS
T01010
Symbol
prpf39.1.L, prpf39, prpf39.1
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
734636 (prpf39.1.L)
Spliceosome [BR:
xla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
734636 (prpf39.1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
Mad3_BUB1_I
TPR_MalT
Ribophorin_II
ARM_TT21_2nd
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
734636
NCBI-ProteinID:
NP_001089580
Xenbase:
XB-GENE-994641
UniProt:
Q4KLU2
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All DBs
Position
8L:complement(83502995..83527972)
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AA seq
641 aa
AA seq
DB search
MEKSPEHCAEGSPSPATESAPSATEPPLPSTEPPLPSTEPPLPSTEPPLPPLPPDFEKYW
KSVQAYPEDFNTWTYLLQYVEQENHLFAARKAFDAFLAHYPYCYGYWKKYADLEKKNNNI
LEADEVYRRGIQAITLSVDLWMHYLNFLKETLDPADPETSLTLRGTFEHAVVSAGLDFRS
DKLWEMYINWETEQGNLSGVTSIYSRLLGIPTQFYSLHFQRFKEHIQGHLPREFLTSEKF
IELRKELASMTLHGGTNDDIPSGLEEIKDPAKRTTEVENMRHRIIEVHQEIFNLNEHEVS
KIWNFEEEIKRPYFHVKPLEKAQLNNWKEYLEFELENGSNERIVILFERCVIACACYEEF
WIKYAKYMENHSVEGVRHVYNRACHVHLAKKPMVHLLWAAFEEQQGNLEEARRILKNIET
AIEGLAMVRLRRVNLERRHGNVKEAEHLLEEAMNKTKTSSESSFYAIKLARHLFKVQANV
VKARKVLSNAIQKDKENTKLYLNLLEMEYNCDIKQNEENILAAFDKAIKSPMSIAMRVKF
SQRKVEFLEDFGSDVNKLLDTYNEHQKLLKHQDIVKRKAENGLEQPEAKRLHAEEVSTAA
SVPVTTASMDATQSGYNYGSWYQYNYPANWNFGQYYNTPST
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagtctcctgagcactgtgcagagggatcaccttctccagcaacagaatcagca
ccttcagcaacagaacctcctttgccatcaacagaacctcctttgccatcaacagaacct
cctttgccatcaacagaacctcctttgccacctcttcctcctgattttgaaaagtattgg
aaatctgtgcaagcttatcctgaagactttaatacatggacatacttgttacagtatgta
gaacaagagaatcatctgtttgctgcccggaaagcctttgatgcctttcttgcacattat
ccttattgttatggctactggaagaaatatgcagacttggaaaaaaagaacaataacata
ttggaagctgatgaggtatatagaaggggtattcaagctattacattaagtgttgatctt
tggatgcattatcttaatttcttgaaagaaactttagatcctgcagatccagagacaagt
cttacattaagaggaacttttgagcatgcagttgtttcagcagggctagacttcagatct
gacaagctatgggaaatgtatattaattgggaaactgaacagggaaacttgagtggtgtc
acatcgatttacagccggcttcttgggattcctacccagttctacagtcttcattttcag
cggtttaaagaacatattcagggacatttgcctagagaatttttaacatctgaaaaattt
atcgagcttagaaaggagcttgcttctatgactctgcatggtggaacaaatgatgatatt
ccttctgggcttgaggagataaaagaccctgcaaagcgtactacagaagtcgagaacatg
cgtcatcgtataattgaagttcatcaggagatttttaatcttaatgaacatgaagtcagc
aagatatggaactttgaagaagaaataaaaagaccttactttcatgttaagcctctggag
aaagcacaacttaataattggaaagaatatttggaatttgagctagagaatgggtcaaac
gaacgcattgttattcttttcgaaagatgtgtcattgcttgtgcctgctatgaggagttt
tggatcaagtatgccaagtatatggagaatcacagtgtggagggggtgagacatgtttac
aatagagcatgtcatgtgcatctggcaaagaaacctatggttcatttactgtgggctgca
tttgaagagcaacaaggtaacctagaggaagcgaggcggatactaaaaaatatagaaacc
gctatagagggcctggcaatggttcgtttacgaagggtaaacttagaacgaagacatgga
aatgtaaaagaagcagaacatttattggaagaagccatgaacaaaacaaaaactagcagt
gaatcttccttctatgctattaagcttgcccggcaccttttcaaagtgcaagctaatgtt
gtgaaagcaaggaaagttttgtctaatgccatacagaaagacaaagaaaatactaaattg
tacctcaatttgctggaaatggaatataactgtgatatcaagcagaatgaagagaatatt
ttagcagcttttgacaaagcaataaaaagtccaatgtctatagcaatgagagtgaaattc
tcacaaagaaaagttgaattcttagaagattttggttctgatgttaacaagttgttggat
acatataatgagcatcagaagcttcttaaacatcaagatattgtgaagagaaaagctgaa
aatgggttggagcagccagaagcaaagcgattgcatgcagaagaagtgagcacagcagct
tcagttccagttaccactgcaagcatggatgcaactcagtcaggatataactatgggagc
tggtatcagtacaactatccagctaactggaattttggacagtactacaatactccatca
acctga
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integrated database retrieval system
