KEGG   Xenopus laevis (African clawed frog): 734709
Entry
734709            CDS       T01010                                 
Symbol
lsm14b.S, fam61b, lsm14b, lsm14b-b, rap42, rap46, rap55b, RAP55B-B, xRAP42
Name
(RefSeq) protein LSM14 homolog B-B
  KO
K18749  protein LSM14
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    734709 (lsm14b.S)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     734709 (lsm14b.S)
SSDB
Motif
Pfam: LSM14 SM-ATX FDF
Other DBs
NCBI-GeneID: 734709
NCBI-ProteinID: NP_001089649
Xenbase: XB-GENE-5893369
UniProt: Q498K9
LinkDB
Position
9_10S:complement(13676995..13687028)
AA seq 380 aa
MSSGTPYIGSKISLISKAQIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPAPPREE
VYEYIIFRGSDIKDITVCEPPKASHALSQDPAIVQSSLGSAASYQPSVPYSPFRGMPTYS
QLAATSLLSQQYAASLGLAGFPSIPVRKSPMVEQAVQTGPLENQAQKKVQQAKGAPVGLR
GVRQSGPQSQPAPLNVPPPAAPVLGTVNDENRRPPRRRSGNRRTRNRSRGQNRPTTVKEN
AIKFEGDFDFESANAQFNREELDKEFKDKLNFKDDKPEKAGEEKTDSGVETQNSDGNPEE
DPLGPNTYYDRSKSFFDNISSEMKSRRTTWAEERKLNTETFGVSGRFLRGRSFRGGFRGG
RGSAAPRRNQTTQRAGTGRV
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgagctcaggcaccccgtacatcggcagcaagatcagtctgatctctaaggctcagatc
cgctatgaaggcatcctgtacaccatcgataccgagaactccactgtggctctagccaaa
gtccgctcgtttgggacagaagatcgtccgactgaccggccagctccaccccgggaggaa
gtctacgagtatattattttccgcggcagcgacattaaggacatcactgtgtgtgagccc
ccaaaagcgtctcatgctctatcacaggaccctgctatagtccagtcttctctgggctct
gcagcttcctaccagccttcagtgccttacagcccattcagagggatgccaacctacagc
cagcttgctgccacttccctcctgagccaacagtatgctgcctcccttggcctcgctggc
tttccctccatcccagtgaggaagagcccaatggtggaacaagctgtgcagacgggccca
ctggagaatcaggcccagaagaaggttcagcaggcgaaaggggctcctgttggtttgagg
ggggttcggcaaagtggcccccaatctcagccagcacccttaaatgtgccacctccagct
gccccagttctgggcacagtaaatgacgagaacagacgacctccccggcggagatcaggg
aatagacggaccagaaatcggtcccgtggacagaacagaccgactaccgtgaaagaaaac
gccatcaaatttgaaggggactttgactttgaatcggccaatgctcagttcaacagagag
gagctggataaggagtttaaggataaattaaacttcaaagatgataagcctgaaaaggca
ggtgaagagaagactgattctggggtggaaacccagaatagtgatggaaacccggaggag
gaccctctgggtccaaacacatattatgaccggtcaaagtctttctttgataatatctct
tctgagatgaagtccagacgcaccacatgggcagaggagaggaagctgaatacggagacc
tttggggtctctggaaggttcctcagggggcggagcttccgtggcggattcagaggagga
agaggcagtgcagctcctcggaggaaccagacaactcagagggccggcacagggcgggtg
tga

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