Xenopus laevis (African clawed frog): 734718
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Entry
734718 CDS
T01010
Symbol
pds5b.L, aprin, as3, pds5b, pds5b-a, pds5b-b
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B-A
KO
K11267
sister chromatid cohesion protein PDS5
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
734718 (pds5b.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
734718 (pds5b.L)
03400 DNA repair and recombination proteins [BR:
xla03400
]
734718 (pds5b.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
734718 (pds5b.L)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
734718 (pds5b.L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
INTS7_N
EnP1_C
Motif
Other DBs
NCBI-GeneID:
734718
NCBI-ProteinID:
NP_001089658
Xenbase:
XB-GENE-6255297
UniProt:
Q498H0
LinkDB
All DBs
Position
2L:complement(162105830..162180368)
Genome browser
AA seq
1448 aa
AA seq
DB search
MAHSKAKGNDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKEQYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFISRQLKGLEDT
KSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDL
MSSIVCEGDTVSQELLDSVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMF
GAKDSELASQNKTLWQCYLGRFNDIHVPVRLECVKFASHSLVNHPDLAKDLTDYLKVRSH
DPEEAIRHDVIVSIVTAAKKDLLLVNDQLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYS
LQAEAGKESAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYL
YATLDTNAVKALNEMWKCQNMLRHHVKDLLDLIKKPKTEAGSKAIFSKVMVITRNLPDPG
KGQDFLKKFTQVLEDDEKIRGQLEKLVSPTCSCKQAEVCVRDITKKLGNPKQPTNPFLEM
IKFLLERIAPVHIDTESISALIKLVNKSIDGTADDEDEGVTTDQAIRAGLELLKVLSFTH
PISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLQQKAKK
GPPRQAKYSIHCIQAIFSSKETQFAQIFEPLHKSLDPGNPEQLITSLVSIGHIAQLAPDQ
FTAPLKSMVATFVVKDLLMTDRLPGKKTTKLWVSDDEVSTETKVKIQAIKMMVRWLLGMK
NNLSKSGNSTLRLLMAILHTDGDLTEHGKLSKPDMSRLRLAAASAIVKLAQEPCYHEIIT
LEQYQLCALVINDECYQVRQLFAQKIHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQ
CLVKNINVRREYLKQHAAVSEKLFSLLPEYVVPYTVHLLAHDPDYVKVQDIEQLKDIKEC
LWFVLEILMSKNENNSHAFIRKMVEYIKQTKDGQNPDDQKMNEKMYTVCDVAMNIIISKS
TTYSLESPKDPVLPARFFTQPDKNFSNTKNYLPAELKSFFTPGKPKSTNVLGAVNKPLSS
AGKQMLSKSSRMETVSNASSGSNPSSPGKIKGRLDSMELDQSENEDYTMSSPLSGKKSDK
RDDSDLLKSELEKPRRGKKQSLIDQDDSLSMDELSKPAQEPKSRTGQRGRKRAAAASDSE
EQTWQEKRLKEDLLENEDEQNSPPKKGRRGRPPKSAKMAISKEEPTVTTPKRGRKKAVPV
ESPPTDEDDHLEISEEQDFENIDQKRKGRGSSRRTPQKSDSTDSLLDTSRPTPQKRRGRP
PKTPTVQQKKSHVGRPRKVVSKEPESEEEMEMSQNSPALSEHLSNEDESAEEVVVAPSTG
RLRSAKKR
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggctcactcaaaggccaagggcaatgatggaaaaatcacgtatcccccaggtgtcaag
gaaatctcagacaagatttcaaaagaagaaatggttagacggttgaagatggttgtgaaa
actttcatggatatggatcaagactctgaagaggaaaaggagcaatatttgaaccttgct
ttacacttagcctctgactttttccttaaacatcccgacaaagacgtacgattgctcgta
gcctgctgccttgctgatatttttagaatctatgccccagaagcaccatatacatcgcct
gataaattgaaggatatatttatgttcatatcaagacaactgaaggggcttgaagataca
aagagtccccagtttaatagatatttctatttactagagaatatcgcatgggtgaaatcc
tataatatatgctttgagctagaagatagcaatgagatttttacacagctatatagaaca
ttattttctgtgatcaataatggacataatcagaaagtccatatgcatatggtggattta
atgagctctatcgtttgtgaaggagatactgtttctcaggagctgctcgatagtgtccta
gtgaacttggttcctgcacacaagaatttaaacaaacaagcatatgacctggcaaaagct
ctgcttaagagaactgctcaagctattgaaccatacattacaaactttttcaaccaagtt
cttatgcttggtaaaacctccatcagcgatttgtcagaacatgtcttcgatctgattctg
gagctctacaacatcgatagtcatttgcttctttccgttttacctcagctggagttcaag
ctcaagagtaacgacaatgaagaacgactgcaggtggttaaattgctggcaaaaatgttt
ggtgccaaagattcggaactggcttctcaaaacaaaacactttggcagtgctacctagga
agatttaatgacatacatgtgcccgttcgtttagaatgtgtgaagtttgctagccacagc
ttggtgaaccatcctgaccttgcaaaggatttaacagattatcttaaagtgagatcgcat
gaccctgaagaagccattaggcatgatgtgattgtgtctatagttactgctgctaagaaa
gatcttctcctggtcaatgaccaactactgaattttgttcgggaaagaactttggacaaa
aggtggagagtacgaaaagaagcaatgatggggcttgctcagatctacaaaaagtattcc
ctgcaagctgaagctggaaaagaatctgcaaagcagatttcatggattaaagataagctg
ctgcacatatattaccagaacagtattgatgatcgattacttgtggaaaggatttttgct
cagtacatggttcctcacaatttagaaactacagagagaatgaaatgcttgtactacctg
tatgcaacattggatacaaatgctgtgaaagctctgaatgaaatgtggaaatgtcaaaac
atgttgcggcatcatgttaaggatttgctggacttgatcaaaaagccaaagacagaagct
ggcagcaaagcaatattttcaaaagtgatggttattacaagaaacttgccagaccctggc
aaaggtcaagattttttaaagaaatttactcaagtattagaagatgatgagaaaatcaga
ggacagttggagaaacttgtcagtcctacgtgttcctgcaagcaggctgaagtctgcgtg
cgtgatattaccaaaaaactgggcaacccaaagcaaccgaccaacccatttttagaaatg
attaagtttcttttagagaggatagcgcctgtacacattgatacagagtcaatcagtgct
ctgataaagctggttaacaagtcaattgatgggacagctgatgatgaagatgaaggtgtg
accacggatcaagcaattcgagctggccttgaattgctgaaggttctttctttcacccat
ccaatttcatttcattcagccgaaacgtttgaatctctcttagcctgtttaaaaatggat
gatgaaaaagtagccgaggcagcactacaaattttcaaaaacacggggagcaaaattgaa
gaggatttccctcatatcagatctgcattgcttccagtcttgcagcagaaggctaaaaag
ggacctccccgtcaagccaagtattccattcactgcatacaagcaatattttccagcaag
gagacacagtttgcacagatatttgagcccttacataaaagcttggaccctggcaaccct
gagcaactcatcacatcactcgtctccattggccacatagcacagcttgctccagatcag
ttcactgctcctttaaaatccatggttgccacctttgtggttaaagatttgttgatgaca
gatcggcttccaggtaaaaagacaacaaaactctgggtgtcagatgatgaggtgtcgaca
gaaactaaggttaaaattcaagcaattaaaatgatggtgcggtggctgctgggaatgaaa
aataatctcagtaaatccgggaattctaccttacgactcctaatggcaatattgcacact
gacggagacttgacagaacatggaaagctcagtaaaccagacatgtcacggctgagactg
gctgctgccagtgccattgttaaactagcgcaggagccatgttaccatgaaattattacc
ttagaacagtatcagctatgtgcattggtcatcaatgatgagtgttaccaggttagacag
ttgtttgctcaaaaaattcacaaagggctctccagattaagacttccattagaatatatg
gccatctgtgctctgtgtgcaaaagatcctgtgaaagagaggcgcgctcacgcacggcag
tgtctggtgaaaaatattaatgtcagaagagagtatctgaaacagcatgcagctgtgagt
gaaaaattgttctctcttctgcctgaatatgtggttccatatactgttcatttgcttgca
catgacccagattatgtgaaagtacaagatatagagcagctaaaggacatcaaagagtgc
ctgtggttcgtgctggagattcttatgtcaaagaatgaaaataacagccatgcttttatt
cggaaaatggtagaatatattaagcaaacaaaagatggccaaaaccccgatgaccagaag
atgaatgaaaaaatgtacacagtgtgtgatgtggcaatgaatataattatttcaaagagc
acaacatacagcttagagtccccgaaggatcctgtattgcctgcacgtttcttcactcag
ccagataagaatttcagcaacacaaaaaattatcttcccgctgaattgaagtccttcttt
acaccaggaaagccaaaatctactaatgttctgggtgcagtcaataaacccttatcgagc
gcaggaaagcaaatgctatccaagtcatctaggatggagactgtaagcaatgcaagcagc
ggttctaacccaagctctccaggcaagataaaaggaagacttgacagtatggaattggat
caaagtgaaaatgaagactatacgatgtcttctcctctttctgggaaaaaaagtgacaaa
agggacgactcggatctcttgaagtctgagttagaaaagccaaggcgagggaaaaagcaa
tctcttatagaccaagatgacagtttaagcatggatgaattatcaaaaccagcacaggaa
ccaaaatcaaggactggtcagcgtggaagaaagcgagctgcagcagcttctgattcggag
gaacaaacgtggcaggaaaagaggctaaaagaagacttgttggaaaatgaagatgaacaa
aatagcccaccaaaaaagggaagaagaggaagaccacctaagtcggccaaaatggccata
tcaaaagaggagccaacagtcacaactccaaaaaggggaaggaagaaggcagtacctgtt
gaaagtcctccaaccgatgaagatgatcatctagaaataagtgaagagcaagattttgaa
aatatagatcagaagcggaaaggcaggggctcatcaaggaggacccctcaaaagtccgat
tcaacggattctcttcttgacaccagtcggcccacaccacagaagaggagaggaaggcca
cccaaaactcccacagtgcagcaaaagaaaagccatgttggacgtccaagaaaggtagta
agtaaagaacctgaatctgaagaagaaatggaaatgtcccagaatagcccagctcttagt
gaacacctttctaatgaagatgaatctgcagaggaagtagtagtggctcctagtactgga
agactcagatctgcaaaaaaacgatga
DBGET
integrated database retrieval system
