Xenopus laevis (African clawed frog): 734728
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Entry
734728 CDS
T01010
Symbol
smarcal1.L, harp, smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
734728 (smarcal1.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
734728 (smarcal1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
734728
NCBI-ProteinID:
NP_001089668
Xenbase:
XB-GENE-866253
UniProt:
Q498E7
LinkDB
All DBs
Position
9_10L:59543811..59564984
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AA seq
960 aa
AA seq
DB search
MSVCLTEEQKRKIEENRQRALARRAERLAAQQNTLKQTNNSHSTLFNIQKSTVEQGALFS
GQRTNVTAACMAPLQQGSNNKYAFQKTSSGGSAASSLPGTAENKPQAGGNGPCDYKVPAD
PAQDFTSSKNLTGKYVAPKAHCVSSVPSFNDTPNPRQLNPACTTQEQEKPKNSSYSYSRP
DSDTACDKFTAGPGPGPIRNTTAISKFYGANPGIKPALPVSNKTVSEVRDRGVTGSSVEA
VPVKKASSSTRGRCVKHMEGRFRVEVGYSAELIALFKTIPSKAYDPATKMWNFGLEDYAS
LMSEVQRVQSVELKALEGMEGVQIAPPPTSGSGTNINALLAMCNNWQRPNATLRGRCILI
SRSRFEMEIGYHTEIIGLFKQMNTRNYDTKTRKWSFMLEDYQKLMESVRNIQQVEVEPLP
RPVLQAFAPQFEKTTISLAEIEDVDLSHVDSKLIGNLMPFQRDGVNFAISREGRLLLADD
MGLGKTIQAICIAAYYRKEWPLLVVAPSSVRFTWAEAFHRWLPSLNPESVNVIVTGRDSQ
SANLINIISFDLLGKMDKQIAANFKVIIIDESHFLKNVKTARCKAAMPLLKSAKRVMLLS
GTPAMSRPAELYTQIAAVRPTFFPRFHDFGIRYCDAKQMPWGWDYSGSSNLNELKLLLEE
SIMIRRLKSEVLSQLPAKQRKMVVVAPEGITAKTKAALAAAAKEMAKGFKSKVQEKEALL
LFYNRTAEAKIRSVLEYIIDLLESGREKFLVFAHHKLVLDNICEELGKKEVPYIRIDGNT
SSADRQSLCHKFQFSEKSCVAVLSITAANMGLTLSSADLVVFAELFWNPGVLIQAEDRVH
RIGQTSSVNIHYLVAKGTADDYLWPMIQEKIKVLGQAGLSEANFSETTESTDYFYKDPKQ
KTIYDLFQRSFSEQGAENDSDEALLLEACEEVDLGESTCGPTDYSGNACKRRKIDDYFAL
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtctgtctgacggaggaacagaagcggaaaattgaggaaaacaggcagagagca
ttggctaggagagccgagagattggccgcccagcagaatacactcaaacagacaaataat
agccactccactctgtttaacatccagaaatcaaccgtggagcagggagcactcttctca
ggccagagaactaatgtcacagctgcgtgtatggcacctttacaacaaggcagcaataat
aaatatgcctttcagaaaacctccagtggtggtagcgctgcttcctctttacctggcaca
gctgagaataagccgcaagcaggtggcaatgggccatgtgattacaaggtgcctgctgac
ccagcgcaggatttcacttcttctaagaacttaacaggcaaatacgttgcaccaaaagct
cactgtgtgtcgagtgtgcctagctttaatgatacccctaatcccaggcagttaaatcct
gcttgcactacccaagaacaagaaaagcccaagaattccagctattcatactcaaggcct
gactcagacactgcttgtgataagtttacagcggggcctgggcccgggcccatcaggaat
actacagctatctctaaattctatggtgccaacccaggtatcaagcctgctctgcccgta
agtaacaagactgtaagtgaagtgagggacagaggagtcactggcagttcagtggaggct
gtaccagtcaagaaggcatccagctccacccgagggaggtgtgtaaagcacatggaaggt
cggttccgagttgaagttggatacagtgctgaactcattgccttatttaaaacaatccca
agcaaggcatatgatccagcaacaaagatgtggaattttggccttgaagattatgcctct
ctcatgagtgaggtgcagcgggtacagagcgtggagctaaaagccttggaaggaatggaa
ggagtgcagatagctcctcccccaacgagtggcagtggaacaaatattaatgcactgctg
gcaatgtgtaacaactggcagagacccaatgctaccctgagaggcagatgcatcctcatc
tcccgttctcgatttgaaatggaaatcgggtaccacacagaaatcatcggcctcttcaag
cagatgaataccaggaattatgatacgaagacaaggaagtggagtttcatgctggaggat
tatcagaaactgatggagagtgtgcgcaacattcagcaagtagaagtggagcctctccca
agaccggtactccaagcctttgccccccagtttgagaaaaccaccatcagcctcgcagag
attgaagatgtggatttatctcatgtggattccaagcttatcggcaacttaatgcccttc
cagagggatggagtgaactttgctatatcacgggaagggcgtttgcttcttgctgatgac
atgggcttaggaaagactattcaagccatctgtatcgctgcatattaccgaaaagagtgg
cccctgctcgttgtggccccttcctctgtaaggttcacatgggctgaggcctttcaccgg
tggcttccttctttgaacccagaaagcgttaatgtcattgtgactggacgagacagccag
agcgccaatctgatcaacatcattagttttgaccttctggggaagatggacaagcagatt
gctgctaatttcaaagtcattattatagatgaatctcatttcctgaagaatgtgaaaact
gctcgttgcaaagctgctatgccactacttaagagtgctaagagggtgatgttactgtcg
ggaaccccagccatgtccagaccagccgagctgtacacacagattgctgccgtcagacct
actttcttccctcggttccatgacttcggaatccgttactgtgatgccaagcagatgcct
tgggggtgggattattctggatcctctaatctaaacgagctgaaacttctgctggaagaa
tcaataatgattagacgattgaaatccgaggtcctgtcccagcttcccgctaaacagcgc
aaaatggttgtggtggcccccgagggcatcactgcaaagacgaaggcagctcttgcagca
gcggctaaggaaatggccaagggatttaagagcaaagttcaagagaaagaagctctgctc
cttttctacaacagaacagcagaagccaaaattcgatccgtcttagaatacattatagat
ctgctggaaagtggtcgagagaaattcctcgtgtttgcacaccacaaattggttctggac
aacatttgtgaagagctcgggaagaaggaagtcccttacattcgaattgatggcaacacc
tcctctgcagaccgccagtccctatgtcacaagttccagttctccgagaaatcctgtgtt
gccgtcctgtccataaccgcagcaaatatggggctgactctctcttccgctgacttggtt
gtctttgcagaactattttggaacccaggagttttgatccaagcagaggatcgggtgcat
agaattgggcagacaagttctgtgaatattcactacctggtggcaaaaggcacagccgat
gattatttatggccaatgattcaggagaagatcaaggttcttggccaagctgggctctcg
gaagcaaatttttcagaaacaacggagtctacagattacttttataaggatcccaaacag
aagaccatttatgacttattccagagatctttctcagagcagggagcggagaatgactcc
gatgaggctctgttactggaggcgtgtgaggaggttgatctgggagagtccacctgcggt
ccaacggattattctggaaacgcctgcaagcggaggaagattgacgattactttgcactg
tga
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