Xenopus laevis (African clawed frog): 734736
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Entry
734736 CDS
T01010
Symbol
limch1.L, limch1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xla04990
]
734736 (limch1.L)
Domain-containing proteins not elsewhere classified [BR:
xla04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
734736 (limch1.L)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
DZR
Motif
Other DBs
NCBI-GeneID:
734736
NCBI-ProteinID:
NP_001089675
Xenbase:
XB-GENE-5950315
UniProt:
Q3KQW7
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All DBs
Position
1L:38051988..38214914
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AA seq
1083 aa
AA seq
DB search
MASNAALQGEDIPQPQESPPDTACMEAQKWIEQVTGKSFGDRDFRTGLENGILLCELLNA
IKPGLVKKINRLPTPIAGLDNITLFLRGCKELGLKESQLFDPGDLQDTANRTTGRTSDCN
RKLRNVLVTVYWLGKAANGCSSFSGTNLDLKEFEGLLAQIRKENEEIESPKRSIRDSGYI
DCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSQQTPSPDVVLRGSSDGRGSDSESDLPHR
RIPDVRKDDMSARRVSFGENKAFVPFNQYLPNKNNQTAYIPAPLRKKKAEREDYRKSWST
ATSPLGGERPFRSMSMCDMRYEEEGSMLPHSRAHHEHLQHVNSLLKEEDDTWQDDLARWK
TRRRSASQDLIKKEEERKKMERLMSGDSELSDRRKSIKTYREIVEEKERREKELHVAYKN
AKTRGEAERILKSYIEKFTISEAVLEGLVMPKILERSQSVEPSLLSSSEDPNPLKYLRQQ
SLPSPKYTSTVEATVTPSSPCESKSPTGLISPSKNIISKTVPMLTAKPYSQPKNTQEVLK
TFKVDGKVNLNGVEEQKGKESGSQTFAAPSLTRSQMFEGVARVDAPVVETKQDVASIKLN
LARPNTLNSLHESNSLCEDRNHISQKDEPDSFVQEESVHSVEQLSEGNTQSNSTTQAVPA
VSSIEIPPLTVNGKDTEDKRKVEAAELIMHWSLDSNYKEAKKNSLPPLKSSENVEESSKI
KENESSHKVQLNITLQTRNAWRRSQFFLQSVDTECTEKSPALVPNLSSPNRSCTWDPEEE
RKRQEKWQQEQERLLQERYQKEQEKLKEEWEKAQKEVEEEERKYYEEERKIIEDTVVPLT
LSPNSNVHFNISERNGNFIPVLPDHAKRDQENNNGQLMAEPNRVIKNEIHMHSNVTQQQI
LYAHERSMLAAEETQIKGKTEKWEAEPCNHVQSNECNTPTRLTLQAGCKQVMLSESCDLG
SPKTPVDENAVHHNMSSIISTRGIDSKEETLNSSQSTSQCQSPNRSVSGKKLCSTCGLPL
GKGAAMIIETLSLYFHIQCFKCGLCKGQLGDATTGTDVRIRNGLLNCNDCYVKSRTAGHP
TPL
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaacgccgcactccaaggggaagatatcccccagccgcaggagtctccccca
gacacggcttgcatggaggctcagaagtggattgagcaagtcaccggcaaaagctttggc
gacagagacttcaggactggactggagaatggaattcttctatgcgagttattaaatgct
ataaaaccgggactcgtaaaaaagatcaaccgacttcctactcccattgctggattggac
aatataacgttatttctaagaggctgcaaagagcttgggctgaaagaatctcagctgttt
gacccaggtgaccttcaggacacagccaacaggacaacaggcaggacttcagattgcaac
agaaaactgaggaatgtcctcgtcacggtttactggctggggaaagctgcaaacggctgc
tcgtcctttagtggaactaacctggacttgaaggagtttgagggattgctggcacaaata
agaaaagaaaacgaggaaatagagagtccgaaacgcagcatacgggacagtggctacata
gattgttgggactcggagagaagcgactccctctctccccccaggcatggtagagacgac
tcctttgatagtctagactcatttggatctagatcacagcagacaccatctccagatgta
gtcctgaggggaagcagcgacggcagaggaagtgactctgagtctgacctacctcacaga
aggatacctgatgtgcgaaaggatgacatgtctgccaggcgggtgtcctttggtgaaaac
aaagcatttgtgccttttaaccaatacctccccaataagaacaaccaaaccgcctacatc
ccagcacccctgagaaagaagaaggccgagcgcgaggactaccgaaaaagctggagcaca
gccacttcccctctggggggagaacgaccctttaggagcatgagcatgtgtgatatgagg
tatgaagaagaggggagtatgctgcctcacagcagggcacaccatgagcatctacagcat
gtcaacagcttgctcaaggaggaggatgacacatggcaagatgacctagctcgatggaag
acacggagaagaagcgcatcgcaggatctgatcaagaaagaggaagagaggaaaaagatg
gagagactgatgagcggagacagtgaactgtcggaccgtaggaaaagcattaaaacctat
agagaaattgtggaagaaaaagaacgtcgagaaaaagaactgcacgtagcctacaaaaat
gccaagaccagaggcgaggctgaacgaatattaaagagctacattgaaaagtttacaatt
agcgaagctgttcttgagggattagtgatgccaaaaattttagaaagaagccagtcagtg
gagccaagtttattgtcctcatcagaggacccaaacccactgaaatacctgaggcaacag
tctttgccatcaccaaaatatacttccactgttgaagcaactgtcactcccagcagccca
tgtgaatcaaagagtccgacaggtctaatatcaccaagcaaaaacatcatttcaaagacg
gtgcctatgctaacagccaagccttactcccagcccaaaaacacccaggaagtcctcaag
acattcaaggtggacggaaaggtgaatctcaacggggtggaagagcagaagggaaaggaa
tctggaagccagacatttgctgccccatcgctcacccgatctcagatgtttgaaggtgta
gctagagttgatgctcctgttgttgaaacaaagcaagatgtagcttccatcaagcttaat
ctggccagaccaaacacactgaattccttacatgaatccaatagtctctgtgaagacaga
aatcacataagccagaaggatgagccagattcttttgtacaggaggaaagtgttcactct
gtggaacaactgtcagaaggtaacacacagtcaaacagtacaacccaggctgtaccggct
gtgagcagtatagagattccaccattgactgtcaatgggaaggacactgaggataagagg
aaggtggaagctgccgagctgattatgcattggtctctggactccaattacaaggaagcc
aaaaaaaattctttaccacctttaaaaagttctgaaaatgtagaagaatcctccaagatt
aaagaaaatgaatcatcacacaaagttcagctaaacattacgcttcagacccggaacgcc
tggagacgctcccagttttttttgcagtcagtggatacagaatgtacagagaagtcacca
gcactagtacccaatctgagttctcctaaccggtcctgcacatgggacccagaagaagaa
cgcaaacggcaagaaaaatggcagcaggagcaggaaaggctcctccaggagaggtaccag
aaagagcaggaaaaacttaaagaagaatgggaaaaagctcagaaagaagtagaagaagag
gaaaggaaatattacgaggaggaaaggaagataatcgaagacactgtggtcccactgact
ttgtcacccaattctaatgtgcactttaatatctctgaaagaaatggaaactttattcca
gtacttccagaccatgccaagagagatcaagaaaacaacaatggacagctcatggcagag
cccaacagagtgataaagaacgagatacacatgcacagcaacgtaacacagcaacagatt
ttgtatgcacatgagaggtcaatgcttgctgctgaagagacgcagataaagggaaaaaca
gagaagtgggaagcggaaccatgcaaccatgtgcagtctaatgaatgtaacacacccacc
aggttaaccctgcaggcaggatgtaaacaagtgatgttatcagagtcatgtgatcttgga
tcacccaaaactcctgtagatgaaaatgctgtccatcataatatgtcttccataatatcc
acaaggggaattgattccaaggaagagacattgaattcttcacagtctacatcacaatgc
cagtcaccaaacaggtctgttagtgggaaaaaactgtgctccacatgtggacttcctcta
ggcaagggagctgccatgataattgaaaccctcagtctttatttccacatccagtgcttc
aagtgtggactgtgtaagggacaacttggagacgcgaccaccggcacggacgtccgaatt
cgaaatggcctgctgaactgcaatgactgttacgtgaagtccagaacggctggccacccc
actcctttgtga
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