Xenopus laevis (African clawed frog): 734884
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Entry
734884 CDS
T01010
Symbol
sec16a.L
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
734884 (sec16a.L)
Membrane trafficking [BR:
xla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
734884 (sec16a.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
734884
NCBI-ProteinID:
XP_018084720
Xenbase:
XB-GENE-986388
UniProt:
A0A8J0TIW6
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All DBs
Position
8L:complement(4259984..4290593)
Genome browser
AA seq
2345 aa
AA seq
DB search
MQPPPPQAGPPGTGGPPRMGMGNNGYWRKRGPNPVPAASASVQPVTDPFAFGRMTPQSMA
QGSGPIGNPPSVSPSLYPQPIPVHASGAGDQGHGSLPGSVPQPAAMGGMYTNVSAPSPAS
APFPNYPAATVNAQPGPSNMQTFQNTASGLENAFLPVQSRPQSTQSISYNPPSASPLQHF
VSAPSQPTTGSWGSLQSAPPVSAQNYPLPVQQPSHNAPYYSPPYLEVSNLAPRANETPGH
YPPTTVSNPTFQHSYLQPTALNTTDYMHSHNPEQNWFNQPYKDQRHPPLPSPNPVQYPTQ
PPEPHQEATNASAHASSNADSGTISMFFKGGEEENVEIVSSDQQNASVKFDHGSSHYQNA
GHQGVPSLLPQPTVPPLPPISLPSGVPHVPASVSQNVGNVTHPHSAWRQDGLTVNDKTNK
PNAGSQLPYDNAENVECVQNQEVPPNEPSHFNLYPSNLNSDMHRYGSMPGPSLPKNVGSQ
PEAGPNIETPETVGCPVRSDSVSSNYSNLSHKSLPVPTRPPELAGTFIQKESGRLEGDSS
HGFFKQIDSSPMVGDALGQNMGQHTHHSNLSQPPTPSPPKPTGIFMTSANSSFEPVRSHS
IGLKAPDIGQLTMAGDVREGHKVPPNTSVPAAFPGNLEQPPDNLETIFLGKRNSHGTITS
NGNLFQSVGEPPLDNISLLLEKRPSSRAHGSNKKCESPATTLWAQGELPNFGGNVLLAPA
APSLYVPPKTQTEIIQPPEDRSYDSRPDLGTFQASPEEQISSENLENPPKIGDEEQLPSQ
ASSGYASLLSSPPTEALQNQPLLIAQPNQTYNLSQPINFSLSLPNQVKNINSFKETGAAN
DSTVFSLAQCRPEASNPPNYKSAAPNDKFSESLPNQNSVMQRQSSANQAPLNLAAESQKA
QKVENATADLDNKNTIPTTAAPTGPRFPANPNGRPSYQAEKTGALDFTVPRPPVCSVASN
IAAGNSQPVAGGPLFPGQSVRSQNGQAGLDVNKQGFYQQVTKDGPPQQPTMDISHQGGGA
PHEYMVPSSQPLSLVQPAQAPPGGKPIPYPPQAESQVPTSQNPNSTPYNTYGPTEQPPYP
AQPVPSSSAPVNLNNTATYQEQPRPPASHTPQQADPYYYYRSYGAYQQPYPQPYQPLDPR
AAPLYYPDPYAAYDPTYRQYSGSSYANPAKYPYQEPERPSSRSSHSSDRPSSRQGYSSKG
DWNAQSGYYPGYYQNQYDYADPTRWDRYPGAYDPGYRDPRSNYWNYMYNSRDDAYQRNVP
DAYTSRYDVYEDRWQYDPRYVGGFDDEPRRDPTKDDFDRRSVHSEHSVHSMHSGQSSHSR
RSSFSSHSQLSQHSQIYKSQPDLTASAYEPQIQNPPLNEYSYGMYPNDYSTQQALDNYSY
GYTKGTEWQPVEQVPSRPLTPEKFGSPHICARFGPGGQLIKVLPNLPSDGQPALVEIHNM
EVIMQNSPEQEQLRSFPGPLVKDETHKVDVINFAQKKSKECFQNESLLDQESSCLLWDFI
VLLCRQNGTVVGTDIAELLLRDHKTVWLPGKSPNEANLIDFSNEPLEQQQEESGASQLSF
LTDTLQSTGEALQKENERFRELLLFGRKKDALESAMKNGLWGHALLLASKMDSRTHARVM
TRFANSLPINDPLQTVYQLLSGRMPAAATCCGDEKWGDWRPHLAMVLSNLTSNVDVPTRA
MTTMGDTLASRGLMDASHFCYLMAQVGFGIFTKKSTKLVLIGSNHSLTFTKFCSNEAIQR
TEAYEYAQSLGTQSFSLPNIQVYKFIYACRLAEHGLSSQAFHYCEVISKTILKHPSCYSP
VLVGQLLEVSSHLRFFDPQLKEKPEQELFIDPPWLQHLRTLDKQMKHGTIIYDMGRTTPQ
QFACSTPSSEMDQVSQSDGAGAASDIPTHTDNALLASLLPNMMPPVQAVLVPAGPENPPL
VYPPYTGNDPSYPGTPQGLAPSSGPPTPAPNFVPFAVEQAPLYPPAALQPYPPPPQATDY
APPMQMSQDPGLQRIQQNSPTKTTFPDPEDFYGVMAKMGPGQRSRTVSMSSTHMRRTRTT
SESSTHSIGSGRRSSMGIQPSPPPASIPEADRAEEKKEHKPHGSSQGSGRSWFPLKFGWL
MGKGKNEAHLPDDRNKSIVWDEKKQRWVNQDEPEEESKPLPPPPPGMPKKPQTVSSLPGG
PPNPSVNVFSIRAAGARGRYVDVLNPGGTRPTNLVPPPADLFAPLAPMSIPTNLFVPNAV
PEEGQHVEASAAEMVQPAGQMGLSNPPQAQMPGMASLPPGSDFPTNQEEGQMGELSRSSS
LSSLSREVSQHMEQAHVAPASGPPPTGAVPFYNPSQFAQQQPPPSAPAGGPRPGRLGQRK
YPSLK
NT seq
7038 nt
NT seq
+upstream
nt +downstream
nt
atgcagccccctcctccgcaagcagggcctcctggcacgggcggtcctccccgcatggga
atgggcaataatggctactggcgcaaaaggggacccaatcctgtaccagctgcttcagct
tcagtgcaaccagtaacagacccttttgcctttggccggatgaccccacaaagtatggca
cagggaagtggcccgataggaaacccaccgagtgtttccccttcgctgtaccctcagccc
atacctgtacatgcatcgggtgcaggagatcaaggacatgggtcactaccaggatctgta
ccacaacctgctgctatgggggggatgtatacaaatgtatctgccccatcaccagcaagc
gccccctttcccaactacccagccgccacagttaatgctcagcctggacccagtaacatg
cagacttttcagaatacagcgagtggacttgaaaatgcctttctgccagtgcaaagcagg
cctcagtcgacacaaagcatcagttataaccctccatctgcttcacctttacagcacttt
gtctctgcaccatctcagccaactactggttcctgggggtccttacagagtgcacctcct
gtctcagctcagaactaccctcttcctgttcaacaaccatcccataatgctccttattac
tccccaccttatttagaagtgtctaatctggcccctcgagccaatgaaactcctgggcat
tacccaccaaccaccgtctccaatcctacctttcagcacagctatttacaacccaccgct
ttaaatacgacagactatatgcatagccacaatcccgagcagaactggtttaaccaacct
tacaaggatcaacggcatccacctctccccagtcctaaccccgtacaatacccaactcag
ccacccgaacctcatcaggaggcgactaatgcatctgctcatgcctcctccaatgcagac
tctggtactatatcaatgttttttaaagggggcgaagaagaaaatgtagaaatcgtttct
tcggaccagcagaatgcatctgttaaatttgatcatggctcttctcattatcagaacgct
ggacatcaaggtgtgccttctctcctgccgcagccaacagtcccgccacttccacccatc
tctttaccatctggcgttccccatgtccccgcgtctgtgtctcagaatgttggaaatgtg
acccatccgcattcagcttggcgacaggacgggttgactgttaacgataaaaccaataaa
cccaatgctggaagtcaattgccctatgacaatgctgaaaatgtagagtgtgtccaaaac
caggaagtcccccccaatgagcccagtcattttaacctttatccttctaatctaaattca
gatatgcaccgatatgggtcgatgcctggaccctctctaccaaaaaatgttggcagccaa
cctgaagcaggtcctaacatagagacaccggaaacagtgggttgtcctgtgagatccgat
agcgtttcttcaaattatagcaacctgagtcacaaaagcctacctgtgcccacccgacct
ccagagctggccgggacttttattcagaaggagagcgggaggcttgaaggtgactcttcc
cacggtttctttaagcaaatcgattcatctcctatggtgggtgatgctttagggcagaat
atgggtcagcacacgcatcacagcaatttatcccaaccaccgactccaagtcctcctaaa
cctactgggatcttcatgacgagtgcaaatagttctttcgaaccagtaagatcacacagc
attggtttgaaagcgccagacataggccaattgacaatggccggagacgtaagagagggg
cataaggttccaccaaacacctctgtcccggcagctttccctggtaacttggaacaacct
ccggataatctggaaaccatattcttaggtaaaagaaattctcatggaaccattaccagc
aacgggaacctgttccaatctgttggggaaccgccattggacaatatatcactactgctt
gagaaacgtccatcgtcaagggcacacgggtctaacaagaaatgcgaaagcccagcaacc
accctgtgggctcaaggagagcttccaaattttggaggaaatgttctgttggctcctgcg
gctccttcactctatgtgccccctaaaacccaaactgaaataattcagccccctgaagat
cggtcttatgattcacgcccagatctggggacttttcaggcctctccagaagaacagatt
tcctctgaaaaccttgagaatcccccaaagatcggagatgaggagcagcttccctcgcag
gcaagttcaggttatgccagtttgttatcttcgccgcccactgaggcgctgcagaatcag
cccttgctaatcgcccaaccaaatcaaacctataatttgtcgcagcctattaatttttcg
ttgtcgttaccaaatcaggtgaaaaacattaattcctttaaggaaacgggagcagccaat
gacagtacggtgttttccctggctcaatgccgacctgaggcttctaacccacctaattac
aaatctgcagctcctaatgataaattctctgaatctcttcccaatcagaattccgttatg
cagcggcaatcatcagccaatcaagcgcccctcaatttagccgcggaaagccaaaaggca
cagaaggttgaaaacgcaactgccgaccttgataataaaaacacaattccgacgaccgct
gctccgacggggccacgtttccctgccaatcctaacggccggcccagttatcaagcagag
aagactggcgctttagattttacagtccctcgtccgccggtctgttctgttgccagtaac
attgctgcaggtaacagtcagccagttgctggagggccgctctttcctgggcagtctgtc
cgctctcagaatggtcaggcaggcttagatgttaacaagcagggtttttatcagcaggtc
actaaggatgggcccccgcagcagcctactatggatatttcacatcaaggaggaggggcc
ccgcatgaatacatggtcccttcctctcagccgctctccttggtgcagcctgcacaagca
cctccaggaggtaaaccaattccataccctccacaagctgaaagccaagttccaacgtca
cagaaccccaacagcactccttataacacatacggaccaactgaacagcctccctatcca
gcccagcctgttccttcctcatcagctccagtgaatctcaataacacagcaacatatcag
gagcagcccaggcctcctgcctcccatacccctcaacaagctgatccttattattactac
aggtcttatggtgcctaccaacagccatacccgcagccttaccaacccctggatccaagg
gcagcgcctctttactatccggacccctatgcagcttatgaccccacctataggcagtac
agcgggtcttcatatgcgaaccctgccaagtacccctaccaggagcccgaacgtcccagt
tctagatccagccactcttctgatcgtccctcctcaaggcagggttatagcagtaaagga
gactggaatgcacaaagtggttactacccggggtattatcagaatcaatatgattatgca
gaccctacccgctgggaccgctatcccggagcctatgaccctggctatagagatcccagg
agtaattactggaattatatgtacaacagccgtgatgatgcgtaccaaaggaacgtaccc
gacgcttataccagcagatatgacgtgtatgaagaccgctggcagtatgacccacgttat
gtgggcggctttgatgacgagccgcggagagaccccacaaaggacgactttgaccggcgc
agtgttcacagcgagcattcagtccatagcatgcacagcggccagagctcacacagccgg
agaagcagtttcagctcccattcccaactttcccaacatagccagatctacaaaagccag
ccagacctgactgccagcgcctatgaaccccaaattcagaatcctccgctcaatgagtat
tcatatggcatgtaccccaatgactacagcacccagcaggcgcttgataattactcttac
gggtacaccaagggcacggagtggcaacctgtagagcaagtgccttcaaggccattgact
ccagagaagtttgggagcccacatatctgtgccaggtttggtccagggggtcagttaatt
aaggtgctgcctaaccttccttcagatgggcagccggccttagtggaaatccataacatg
gaggtcattatgcagaacagcccagagcaggaacagctgagaagtttccccggaccttta
gtgaaggatgaaactcacaaagtcgacgtcatcaattttgctcagaagaaatccaaggag
tgttttcagaacgagagcctgctagaccaagagtcctcttgcctgctctgggacttcatc
gtgcttctgtgccggcaaaacgggactgttgtgggaacagatatcgccgagctccttttg
agagatcacaagaccgtgtggcttcctggaaagtctcccaacgaagccaacctgatcgat
ttcagcaacgagccgctggagcagcagcaggaggagtcgggggcttctcagttgtccttc
ctcacggataccttgcaaagcaccggggaagctctacaaaaggagaacgagcggttcaga
gagctgctactttttgggcgtaaaaaggatgccttagaatctgctatgaaaaacggactg
tggggccacgctttgctcctcgccagcaaaatggacagccgaacgcatgccagagttatg
acaaggtttgccaacagccttccaattaacgatcccctgcagactgtgtatcagctcttg
tctgggaggatgccagcagcagccacgtgctgcggagatgagaaatggggcgactggcgt
cctcacttggcgatggtgctgtccaatctgaccagcaatgttgacgttcccaccagggcc
atgacgacaatgggagatacattagcgtctcgggggctaatggatgcctcacacttctgc
tatttaatggcacaagtcggctttggcatctttaccaagaaatccactaagttagtcctc
attggatccaaccacagtttaacctttacaaagttttgctctaatgaagccatccagaga
acagaggcctatgaatatgcacagtcgctaggcacccagtctttctctctcccaaatata
caggtttacaagttcatctacgcctgtcgcttggcagaacacggattatcctcgcaggcc
ttccattactgtgaagtcatttccaagaccatcctgaagcacccgtcgtgctactcccct
gtgcttgtcggccagctgctggaggtctcctcccatttgcggttctttgacccacagctg
aaggagaagccagaacaggagttatttatcgaccctccctggctgcagcacctccgcacc
ttggataagcaaatgaagcatggtactataatttatgacatgggcagaaccacaccacag
cagtttgcctgcagtacaccaagctcagagatggaccaagtgagccaatcagatggtgca
ggagcagccagtgacataccgactcatacagataatgcactgttggccagtctgctgccc
aacatgatgcccccagtgcaagctgttttagttcctgctggtcctgaaaatccgccactt
gtatatccaccctacacagggaatgatccctcctacccaggtacccctcagggtctggct
ccctcatctgggcctccaactccagctccaaattttgtgccatttgctgtggaacaggca
cctctttatccacctgctgctctacagccatacccaccccctccccaggcaacagattat
gcacctccaatgcagatgagtcaggatccaggactgcaaaggattcagcagaattccccc
accaaaaccaccttccccgatcctgaagatttctacggtgtcatggcaaaaatgggtccc
gggcagagatcacggacagtgtcgatgtcatcaacacacatgaggcggacacggacaact
tccgagtcatcgactcattctatagggtcagggcgtagaagctccatgggcatccaaccc
tcgcctcctccagcttctatcccagaggcagacagagcagaagagaagaaagaacataag
cctcatggctcatcccaagggagtggtagaagttggtttcccctgaaatttggctggttg
atgggcaaaggcaagaacgaagcacacttacctgatgacaggaataaatctattgtgtgg
gacgagaagaagcagcggtgggttaaccaggatgaaccagaagaagagagcaaaccattg
cctccgcctccaccagggatgccgaaaaagccccagactgtttcatctctcccagggggt
ccccccaacccttccgtcaatgtgttttccatcagagcagcaggggcaaggggtcgttac
gtcgatgtcttaaacccagggggtacccggcccactaacctggtccctccacctgctgat
ttgtttgcacctttggcccccatgtctatccccacgaacctgtttgttccaaatgcagtc
ccggaagagggtcagcatgtggaagccagtgcagcagaaatggtacaacccgcgggtcag
atggggctcagtaaccctccccaggcacagatgcccggcatggcctctctgccccctggg
tccgattttccaaccaatcaggaggaggggcagatgggagagctttcccgatctagctct
ctcagttccttatcccgtgaagtaagccagcatatggagcaggctcacgtggcccctgcc
tcgggccccccacctacaggggctgtccccttctacaacccctcccagtttgcacagcag
cagccgccgccttctgccccagcggggggtccacgacctgggcgtctcggccagaggaaa
tacccctccttaaaataa
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integrated database retrieval system
