Xenopus laevis (African clawed frog): 734923
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Entry
734923 CDS
T01010
Symbol
qki.S, qk, qk1, qki-a, qki-b, quaking
Name
(RefSeq) protein quaking-A
KO
K14945
protein quaking
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
734923 (qki.S)
Spliceosome [BR:
xla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
734923 (qki.S)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
STAR_dimer
Quaking_NLS
KH-I_KHDC4-BBP
KH_1
A-ATP_synth_H_N
KH_KRR1_2nd
KH_12
Motif
Other DBs
NCBI-GeneID:
734923
NCBI-ProteinID:
NP_001089857
Xenbase:
XB-GENE-6254729
UniProt:
Q32NN2
Structure
PDB
PDBj
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All DBs
Position
5S:46143345..46243106
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AA seq
333 aa
AA seq
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MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFTHLERLLDEEISRVRKDMYNDT
MNSSSNEKRTSELPDGIGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGC
KIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAELKLKRAVEEVKKLL
VPAAEGEDSLKKMQLMELAILNGTYRDANLKSPTGQAPRIITGPAPVLSPAALRTPTPAG
HTLMPLIRQIQTAVMPNGTPHPTATLMQQAPEGGLIYTPYEYPYTLAPATSILEYPIEAS
GVLGAVATKVRRHDMRVHPYQRIVTADRAATGN
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggttggggaaatggaaacaaaggagaagccgaagccgactccagactatctaatgcaa
ctaatgaacgacaagaagctgatgagcagcctgcccaacttctgcgggatatttacccac
ctagagagactcttggatgaagaaatcagcagagtacggaaagatatgtacaacgatact
atgaatagtagcagcaatgaaaaaagaacctctgaacttcccgatggtattggacctatt
gtacaattgcaagaaaaactttatgtgcctgtaaaagaatatccagattttaattttgtt
ggacgtattctgggacccagaggactcaccgctaaacaactcgaagcagaaacagggtgt
aaaattatggtccgaggcaagggctccatgagggacaaaaagaaggaggaacaaaacaga
ggcaagcctaactgggagcacctgaatgaagatctgcatgtactgataacagttgaagat
gcacaaaacagagcagaacttaagttaaaaagagcagtggaagaggtcaagaaactgtta
gtcccagcagcagaaggagaagacagcctcaaaaaaatgcagttgatggaactggctatc
cttaatggcacctacagggatgccaacttaaaatcaccaacaggtcaggccccccggatt
ataactgggcctgctcctgttctgtccccagctgctctgcgtacacctacgccagctgga
cataccttaatgcctttgatcagacaaatacagaccgctgttatgccgaatgggacccct
catccgactgctacacttatgcaacaagcacctgaaggtggtttgatctacacaccttat
gagtacccttatacactggccccagctacttcaatccttgagtatcccattgaagcaagt
ggagtattaggtgcggtggctactaaagtaagaaggcatgatatgcgggtccatccttac
caaaggattgtgaccgcagacagagccgccaccggcaactaa
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