Xenopus laevis (African clawed frog): 734926
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Entry
734926 CDS
T01010
Symbol
u2af1.S, u2af1
Name
(RefSeq) U2 small nuclear RNA auxiliary factor 1 S homeolog
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
734926 (u2af1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
734926 (u2af1.S)
Spliceosome [BR:
xla03041
]
Complex A
U2 snRNP components
U2 related factors
734926 (u2af1.S)
Complex B
734926 (u2af1.S)
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
GRP
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
734926
NCBI-ProteinID:
NP_001089860
Xenbase:
XB-GENE-877058
UniProt:
Q32NM8
A0A974DGT5
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All DBs
Position
2S:29156012..29163428
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AA seq
245 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVKDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGFGGGGGGGAGGGGGGRDRDRRRSRDRE
RSGRF
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtatctggcgtccatcttcggcaccgaaaaggacaaggttaactgctcattt
tactttaagattggagcatgtcgccatggagaccgatgctcccggcttcacaacaaaccc
accttcagtcagactatcgctctgctgaacatttatcggaacccacagaactcctcccag
tcagcagatggactccgatgtgccgtgagtgatgtggagatgcaggaacattatgacgag
ttctttgaggaggtatttacagagatggaggagaagtatggggagatagaggaaatgaac
gtctgtgataacttgggagaccatctagtgggaaacgtctatgtcaagttccgccgagag
gaagatgctgaaaaggctgtgaaggatctgaacaaccgctggtttaatgggcagccaatc
catgccgagctgtctcccgtcactgactttagggaggcttgctgccgccaatacgagatg
ggggagtgcacgcgtggggggttctgcaacttcatgcacctcaaaccaatctctcgagag
ctacgcagggagttgtacggacgccgaaggaagaagcaccgttctcgctccagatcacgg
gaacgtcgctctcgatccagggaccgtggtagaggaggttttggaggagggggtggtggt
ggagcaggaggaggcggcggcggcagggaccgggaccggcgaagatcaagagaccgcgag
aggtcgggtcgtttctga
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