Xenopus laevis (African clawed frog): 734967
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Entry
734967 CDS
T01010
Symbol
usp6nl.L, usp6nl
Name
(RefSeq) USP6 N-terminal like L homeolog
KO
K20133
USP6 N-terminal-like protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
734967 (usp6nl.L)
Membrane trafficking [BR:
xla04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
734967 (usp6nl.L)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
734967
NCBI-ProteinID:
NP_001089900
Xenbase:
XB-GENE-998651
UniProt:
Q32NF9
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Position
3L:88311411..88394502
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AA seq
820 aa
AA seq
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MNTEVDQDVAVKAAQERAEIVAKYDRGREGAKIDPWEDADFMLYKVTDRFGFLHKEELPF
HDEVAQKQKLLEIERTTKWVKMIKSWDRYKNSEKLHRRIYKGIPLQLRGEVWSLILDVPK
LKEQKRDLYLVLKQRARRLSTDIRQIDLDVNRTFRDHIMFRDRYGVKQQALFHVLAAYSL
YNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGFFVPGFPKLLRFQEHH
DKIVKKFMPKLKQHFETQELYTSLYTMKWFFQCFLDRTPFILNLRVWDIYILEGERILTA
MSYTILKLHKRTLIKQSLEDLIGFLQEELARDFHYDDDYVIEQLSLSLTELRRAKLGLPP
PGKDEEFPMKPLGQIPPEPLPTALNHVVNGQSTTNRLPSQVKSDKVPSPSKLLQNSTSIE
RRRKNSMEKANLKMAKKGQADSHSEQNKVDIEYRKYSDYSLNQKDNKLNNHAAANKNSNA
TPNTSKGIAPLWKMPSEPKNKDLLKIAEGKGKPPDYNAANHSESQAAIVKHTSRHLDVEG
KRGSNASQYDNVPGGDDSDNTNEKRYSADSFTQRNTVYSTSTVSRNPSKGSSPSRISENS
GIVFIQHSPSRSVHLQDPDDVFSIKQPPPSYSNPPLYTENSVSKPNSEQYSPINLVSPSR
RSYGQSFDLPPDKMPVNPTARQYNVTSPSHRIEVLPADESATLHLSSYNQKLNTKYILPP
VDYHMDHTFFPDTAFGTIGQPLNREVSQSYLSSLQKSPNFPPSTGQHYNFSSVSANSPVR
LRTSPRTNREPPPQYLHSNSGATPLRNPRDGIIMHESVML
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagaagtagaccaggatgtagctgttaaagctgctcaggaacgagctgaaata
gttgcaaaatatgacagaggccgagaaggtgcaaagattgatccttgggaagatgctgac
tttatgctttataaagtcactgatcgatttggatttttacacaaagaggaactgccattt
catgatgaggtagcacaaaagcaaaaacttcttgaaattgaaagaactacaaaatgggtg
aaaatgataaaaagctgggataggtacaagaacagtgaaaagcttcacaggaggatttat
aagggcatcccacttcaacttagaggagaagtgtggtctctaatcttggatgttccaaaa
ctgaaagagcagaaaagagatctttacctggtcctaaaacaaagagcaagacgcttgtct
actgacatcagacaaattgacttggatgtgaacagaacgtttcgagaccacatcatgttc
agagacagatatggtgtaaagcagcaagctttgtttcatgtgttggcggcctattcactg
tataacacggaagttggatactgtcaagggatgagtcagattacagctttactgcttatg
tatatgaatgaagaagatgccttttgggctctggtaaaactgttctcagggcccaaacat
gctatgcatggattttttgttccaggtttcccaaagctcttgagattccaagagcatcat
gacaagatagtaaagaaatttatgcctaaacttaagcagcattttgaaactcaggaactt
tacacaagtctgtatacaatgaaatggtttttccagtgcttcctagatcggactcctttc
attctaaacttgagggtatgggacatttacatacttgaaggagagaggattctcaccgcc
atgtcctatactatattaaaacttcacaaaagaacactaattaaacagtcattggaagat
ttgattgggttcctacaagaggaacttgccagggattttcattatgatgatgattacgta
attgagcagctcagcttgtccttgacagagctcagacgtgcaaagcttggccttcctcct
cctggcaaagatgaagagtttccaatgaaaccactgggccagattccaccagagcctcta
cctacagctctaaatcatgttgtgaatggacaaagtacaaccaacaggcttccctctcaa
gttaaatcagataaggtaccttcacccagtaaactgttgcaaaactccacaagcattgaa
agacggagaaagaactccatggagaaagctaatttaaaaatggcaaagaaaggacaggct
gattcccattcagaacaaaacaaagtggatattgaatacaggaaatattcagattattct
ttaaaccagaaggataataaattaaataaccatgctgcagctaacaagaattcaaatgca
acaccaaatacatcaaagggtattgcacctttgtggaagatgccttcagaacccaaaaat
aaggatctcttaaaaatagctgagggaaagggtaaaccaccagattacaatgctgcaaat
cattcagaatctcaagctgcgattgtcaagcacacaagtaggcatttagatgtggaaggt
aaaagagggtccaatgcatctcagtacgataatgttcctggaggggacgatagtgacaat
actaatgaaaaaagatatagcgctgattcctttacccagagaaacactgtttactcaaca
agtactgtatcacggaatccctcaaaaggatccagtccatcaagaatatctgaaaattct
ggaattgtattcatacagcactctccatcacgctcagtacacttacaggatccagatgat
gtatttagcataaaacagccaccaccatcatacagcaacccacctctttacactgaaaat
tcagtgagtaaacctaatagtgaacaatattcaccaataaacttggtgagcccttcaaga
agatcttatggacaaagctttgatttgcctcctgataaaatgcctgtaaatcccactgca
aggcaatacaatgtcacatctccttctcacagaatagaagtcttacctgctgatgaaagc
gcaactctgcatttaagtagttataaccaaaaattaaacaccaaatatattttaccacca
gtggattatcatatggaccatacattctttcctgataccgcatttggaacaattgggcag
ccattaaatagagaggtctctcaaagttacttatccagtttgcaaaagtccccaaatttt
ccaccctcaacaggtcagcactataatttctcttctgtttctgctaatagtccagtgaga
ctaaggacttctcctcgtactaatagagaacctcctccacaatatctacattcaaattct
ggagctacgcctcttagaaatccacgtgatggtattataatgcatgaatctgtgatgctg
tga
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