Xenopus laevis (African clawed frog): 734977
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Entry
734977 CDS
T01010
Symbol
parpbp.L, c12orf48, PARI, parpbp, parpbp.S
Name
(RefSeq) PCNA-interacting partner
KO
K27412
PCNA-interacting partner
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xla03400
]
734977 (parpbp.L)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
734977 (parpbp.L)
TLS (translesion DNA synthesis) factors
Other TLS factors
734977 (parpbp.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
Motif
Other DBs
NCBI-GeneID:
734977
NCBI-ProteinID:
NP_001089910
Xenbase:
XB-GENE-1004679
UniProt:
Q32N66
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All DBs
Position
3L:56456930..56484731
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AA seq
567 aa
AA seq
DB search
MDCPHQDVLHLIKYFRKEWPVVSDSERTTICGADNMLLTLQLALAEVNKQNGKEFSVSLS
DVLLTWKYLVKHKLGLACEDTVVPKDYADIQKTYDLFLKNSNSLDLIDIYEKISTAGSSE
AHFLSSEQLLDFLTNDVCLSEGTDFPIVSTPCKNNLDTVKVKPTLKRIFLAYLNLLVNAK
NDFALAQVLNCPERGLGREAFTDLKHTSRLKNMSIFLVATSFIRTIELGGKGYAPSESDP
LRKHLKGLSLFVHFIDRLNEIFGETHDPRTAGELLLSTIKMHLIKGRGSGDPLSEAATEV
AQDLDLRIKYLINLVSEDKSSGTTGISPVRPKIRAINRGTASGGRETIKTLLKLLDEEAA
NPPSKNKADLLCADEENTLFGAFSLFTLFRSPEQTGSSPKALSQRVQKAINKDKPKLKHN
LIRSQFACTYKDSNLTQTKQWDFPSMSQVPSCIHPAPKIVPVLCFDEEPLENDLQKGLKQ
SSGNIDLKTAEQVKNKPCKNVGNKRSKRKQVDIQSETTNGQENEPPQKKAVVELTSSKAN
KQGVSRNKASKNKLITGQAKLTSFFRV
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggattgtcctcatcaagatgtgttgcatttaatcaaatactttcgaaaagagtggcct
gttgtgtctgattctgagagaacaacaatatgtggcgcagacaatatgcttctgacttta
cagttggctcttgccgaggttaataaacagaatggcaaagaattttctgtatctcttagt
gatgtgctgctaacatggaaatatttggtaaaacataagcttggccttgcttgtgaagac
acagtggttccaaaggattatgcagatatccagaagacctatgatctgttcctgaaaaac
agtaattcattggatttaattgatatttatgaaaagatctcaacagccggttccagtgag
gcacatttcttatcctcagaacagctgttagactttctcaccaatgacgtatgcttgtca
gaaggtacagattttccaatagtatcaactccctgtaaaaataacctggatactgtgaag
gtaaaaccaacattgaaaaggatatttcttgcttatttaaatttactggtaaacgctaaa
aatgattttgccttggcacaagtacttaattgcccagaaaggggattaggaagagaagca
tttactgacctgaaacacacctcaaggttgaagaatatgtccattttcttggtggctaca
tctttcataagaactattgagcttggaggtaaaggttatgcgccatcggagtctgatccc
ttacggaaacacttaaaaggactttctctttttgttcactttattgatagacttaatgaa
atttttggagagacacatgatccaagaactgcaggggagctgttactgtcaacaatcaag
atgcatctcataaaaggaagaggcagcggggatccacttagtgaggcagcaaccgaagtt
gcacaagacctggatctgaggattaaataccttattaatttagttagtgaggacaaatct
agtggcaccacaggcatcagcccagtacggcctaaaattcgggccataaaccgtggcact
gcttcaggtggtagggaaacaataaaaactctgttaaaacttttggatgaagaagctgca
aatcctcctagcaaaaacaaagcagatcttctttgtgctgatgaagaaaatacccttttt
ggagctttctctctctttaccctatttaggtctcctgaacagactggatcttcccccaaa
gctctaagtcaacgtgtgcagaaagctataaacaaagataaaccaaagttgaaacataac
ctaatccgatcacaatttgcctgcacctataaagacagtaacttgactcaaacaaaacaa
tgggattttccaagtatgagccaagtgccaagttgtattcatccagcaccaaaaattgtt
ccagtactctgttttgatgaggagccattagaaaatgacttgcaaaaaggacttaaacag
agttctggaaatattgacctcaaaactgctgagcaagtaaagaacaaaccatgcaaaaat
gtggggaacaaaaggtcaaagaggaagcaagtggacatacagagtgaaaccacaaatgga
caggagaatgaacccccacaaaagaaagcagtagttgagctaacatcctcaaaggcaaat
aaacagggtgtatctagaaacaaagcatcaaagaacaaactaattactggacaagccaaa
ttaaccagcttcttcagggtctaa
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