Xenopus laevis (African clawed frog): 734979
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Entry
734979 CDS
T01010
Symbol
acin1.S, acin1, acinus, acn
Name
(RefSeq) apoptotic chromatin condensation inducer 1 S homeolog
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03013
Nucleocytoplasmic transport
xla03015
mRNA surveillance pathway
xla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
734979 (acin1.S)
09122 Translation
03013 Nucleocytoplasmic transport
734979 (acin1.S)
03015 mRNA surveillance pathway
734979 (acin1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
734979 (acin1.S)
03041 Spliceosome [BR:
xla03041
]
734979 (acin1.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
734979 (acin1.S)
Spliceosome [BR:
xla03041
]
Complex C
Other components
EJC/TREX
734979 (acin1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
RRM_1
Motif
Other DBs
NCBI-GeneID:
734979
NCBI-ProteinID:
NP_001089912
Xenbase:
XB-GENE-959541
UniProt:
Q32N60
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All DBs
Position
1S:130523628..130573939
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AA seq
639 aa
AA seq
DB search
MFECSSPAGERAKFGSTGTRPETRGCLRSSLFFFSPLLLVPFLPLSLSIRPPKVPPSSRP
SPLFLQPAAREMLSENKDCTPESEDVVMEAAECQTEGETQEAAPPQSSEECCEGDDKKES
TTPPRTFKRKISVISASKCSIQPSSSTTMNSDNEGAHPARRRRWGASTATTQKKPSISIS
TESLKNLIPEIKEIKQEAVVDLHAEDTHISEDEAERNGDDSSHDKGLKICRTVTQVVPAE
IKENGQEEGEVKEDEAENAAEPEPEPNPVPVETHVAPPSEPEVKKPPTESPSRAEVRVTL
GDTLLRRSISQQKSGVSITIDDPVRTASQLPSPPRNKMSCIVHICNLVRPFTLGQLKELL
SRTGSIVEENFWIDKIKSHCYVTYSTTEEAVATRNSLHGVKWPQSNPKFLSVDFAEQDEL
DFHRGLLVERPPEPKPEEQPHPHPHVPALRGEHREHDRGAREQWAEREREMERRERTRSE
REWDRDKIREGPRSPSRDRRRKEHAKSKEKKNEKKEKVQEEPPAKLLDDLFHKTKAAPCI
YWLPLTEDQILKKVADRAERAKEREKRRKEQEEQEEEERKERAKEREKEAERNRERAREA
DREKRREHSREHPRERERRETKRHSRSRSTPVRDRGGRR
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagtgtagctcccctgccggagagcgagctaaatttggtagtaccgggaccagg
ccagagacccgcggctgccttcgctcttctctctttttcttttccccgctgcttcttgtt
ccctttcttcctctcagcttatccattcgacctccaaaggttcctccctcctcccgtccc
tccccccttttccttcagccggctgccagggaaatgttatcagaaaacaaagactgcaca
ccagagagtgaggacgtggtgatggaggctgcagagtgtcaaacagagggtgagacccaa
gaggctgcacccccacagtcctcagaggaatgttgtgaaggagatgacaaaaaagagagt
actactccaccaagaacattcaaacggaagatctctgttatatctgccagtaaatgttct
attcagccttcatcatccactacaatgaacagcgacaatgagggtgctcatccagcaaga
cggaggcgctggggagccagtacagcaacaacacagaaaaaaccctccataagcatctca
actgaatcacttaagaatctaatcccagagataaaggagataaagcaagaggcagtggtg
gaccttcatgctgaagacactcacatttctgaagatgaggcagagaggaatggagatgac
agttcccatgacaaaggcctcaaaatttgcagaacggttacacaggtggtaccagcagag
attaaagagaatggacaagaggaaggagaagtgaaagaagatgaggcagaaaatgctgct
gaaccagaaccagaaccaaatcctgttccagtggaaactcatgtagctcctcctagtgaa
ccagaagttaagaaaccccccacagaaagtccttcaagagcagaagttagagtaactttg
ggagacacactcttaagacgttcaatcagtcagcaaaagagtggtgtctctattactata
gatgaccctgttcgaacagcatctcagcttccttctcccccacgcaacaaaatgagctgt
atcgtgcatatctgtaatctggtccgacctttcactttaggacaactgaaggagttgctt
tctcgtacagggtctatagtggaggaaaacttctggatagacaaaattaaatctcactgc
tatgtcacgtactccacaacagaagaagcagttgcaactaggaactctcttcatggtgtg
aaatggccacagtccaatccaaaatttctctctgtcgactttgctgagcaagatgagctg
gatttccatcggggtcttttggtggagcgcccgccagagccaaaacctgaggaacaacct
catccccacccacacgtccctgctctgcgaggtgaacacagggaacatgatcgaggagca
agagagcagtgggcagagagagagcgagagatggaaagaagagaacgcacacgttcagag
agagagtgggatagagacaagatccgggaaggacccagatcaccctctcgagaccgtagg
aggaaagaacatgcaaagtccaaggagaagaaaaacgaaaagaaagagaaagtacaagaa
gaaccccccgcaaaactcttggatgatttatttcacaaaaccaaagctgccccttgtata
tattggctcccactcaccgaagaccagattctgaaaaaagttgcagatagggcagagcgt
gccaaggagcgagagaagcgacggaaggagcaagaggagcaagaagaggaggagagaaaa
gagagggcaaaggagagggaaaaagaggctgagagaaatcgagagagagcacgagaggct
gaccgagaaaagagaagagaacacagtagagagcacccgcgtgaaagagagcggcgggaa
actaagaggcacagccgcagtagaagtacaccagtgagagacaggggaggccggcgttaa
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