Xenopus laevis (African clawed frog): 735009
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Entry
735009 CDS
T01010
Symbol
elp1.S, ikbkap, ikbkap.S
Name
(RefSeq) putative elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xla03016
]
735009 (elp1.S)
Transfer RNA biogenesis [BR:
xla03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
735009 (elp1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_WDR19_1st
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
735009
NCBI-ProteinID:
NP_001089940
Xenbase:
XB-GENE-5813405
UniProt:
Q2TAQ1
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Position
1S:complement(84564827..84644378)
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AA seq
1170 aa
AA seq
DB search
MILVKANLSLLGGAKKETQFHGSEGKQAAQQKIMVVKPALPWDDHKPRITWRGDGQLFAV
SSVCKESGTRKIRVWNRELALQSTSESIEGLEQALSWKPSGALIASSQSKPNKHSVIFFE
KNGLVHGEFTLPFTKGQIKVKELLWNSDSTILAIWLEDNEKDESSSGCCVQLWTVGNYHW
YLKQSLNFGTDEMKKIECLMWDPENAYRLHVFSTGWHYFCFDWFWGTDHSDGGQGDVAVI
DGDKVLVTSFQQAVVPPPMSTYFIQLSCAVNEVTFQLEPKKNSGIAILDSTNILSIYRYG
NSTVNDPTVKLGAVSGNGFRTSSQTPKLEKKLRLPRNACDVQLRSFRLLTWVQDDTFLAV
SQESNSSISTVHHMNTDQMDGQDINVRDVGTITGHIISLCYSPNTKHCALQTSNGKIWKY
LCEYPTPAVEPWIDSMGQEVKFPQPCVQTALASIEGEDMVIGLTERSRLFINNSEVASNI
TSFHLYEEFLLLTTHSHTCRCVSLRDTSLKALETQLNSASNPNDETIRKVERGSRIITVV
PCDTKLILQMPRGNLETIHHRALVLAQIRKWLDRLLFKEAFECMRKLRINLNLLYDHNPK
AFLDNVDLFIKQIGSVNYINLFLTEIKEEDVTKTMYPTHALSTMQSSEGAKAKKVDIVCD
AVRAAMEKWDPQKFCLSILTSYVRRTIPQLEIALQKVHELRESPSTTIVSADEALKYLLF
LVDVNELYDHSLGTYDFDLVVMVAEKSQKDPKEYLPFLNKLKKMETNYQRYTIDKHLKRY
KKALSNLSKCGPDYFTEFLSFVKDQSLYTEALELYPHGTVEYKAINAAYGDHLVSKQQYE
LAGLIYARCNSIEKALDAFIASGNWHQVMCMASQLEYSGEKIAALARTVAGKLVEQRKQA
DAAVLLEQYAEDYEEAILLLLEGAHWEEALRLIYKYIRLDILETNLKPALLDAQRNHMIL
FDNQKTTFTRHKERLSVVREMKEKARLGLLDEDVTGCAEADLFSDTSSIMTASDASGKYS
QSNSRISSRSSKNRRKAERKKHSLKEGSPLEDLALLEALAETIQMADKLRGDVHNLLKVL
ILFEYDARAKELQQNFDDLLLLFETSIPEIWPPSVQQNTAAPILGPHSTANSISISYQHQ
RNVNISMQDSELFTAPKLNKNIQWKLSLLL
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgattttggtgaaggcaaatttatcactgttgggtggggcaaaaaaagaaactcagttt
catggatccgaaggaaaacaagcagctcaacaaaaaataatggtagtcaagcctgctttg
ccatgggatgaccataaacctagaatcacttggagaggcgatggacaactgtttgctgtt
agctcagtttgcaaagagtcaggtactcgtaagatcagagtgtggaacagagaacttgca
ctgcaatctaccagcgaatctattgaaggcttagagcaagcactctcctggaagccttca
ggagctttaattgcctcatcacagagcaaacccaataaacacagtgtaattttctttgaa
aaaaatggtcttgtacatggagagtttacacttccattcacaaaaggccaaataaaggtg
aaagaacttctttggaattctgactccacaattttggccatctggcttgaagataatgaa
aaagatgagtccagctccggctgttgtgttcagctctggacagttggaaactaccactgg
tatcttaaacagagtttaaattttggaactgatgaaatgaagaaaatagagtgcttgatg
tgggaccctgagaatgcatacagactccatgtcttctccacaggctggcattacttttgt
tttgactggttctggggcacagaccacagtgatggagggcagggtgatgtggctgtaatt
gatggcgataaggttttagtgacatcatttcagcaagctgtggttcctccaccaatgagc
acatactttattcagttatcatgtgcagtgaatgaagttacatttcagcttgagcccaag
aaaaatagtggcattgcaatccttgattctactaatattctaagcatttatagatatggg
aacagcacagttaatgatccaacagtgaaattaggagcagtgagtggcaatggctttaga
acatcttcccagactccaaaactagagaaaaaacttagattgccaagaaatgcatgtgat
gtgcagctgcggagcttccgtctacttacatgggtacaggatgatactttcttagctgtt
agccaagagtcaaactcttccatatcaactgtacaccatatgaataccgatcaaatggat
ggtcaggatattaatgttagggacgtaggaacaataaccggacatatcatcagtctatgt
tatagcccaaatacaaagcactgtgctttacagacatcaaatggaaagatatggaaatat
ctctgtgaataccccactccagctgttgagccctggattgatagtatgggccaggaagta
aaatttcctcaaccttgcgtacagactgcattggcaagcattgaaggagaggacatggta
ataggtttgacagagagatcacgcctatttatcaataactcagaggttgcaagcaatatc
acttcatttcatctgtatgaggagtttcttcttttaacaacccactcacatacatgtaga
tgtgtatcgctacgagacacttcactgaaagcactggaaacacagcttaacagcgccagt
aacccaaatgatgaaaccattcgcaaagtggaaagaggatctagaattatcacagtagtg
ccatgtgacacaaaacttatcttacagatgccaaggggaaatttagaaacaattcaccat
cgagcactggtgttggctcagattcggaagtggcttgacagacttttattcaaagaagcc
tttgaatgcatgcgtaaactcaggattaacctcaatttactttatgaccacaacccaaag
gcatttttggacaatgtggatcttttcataaagcagataggctctgtaaattacatcaat
ttgtttttgacagagataaaagaagaagatgttacaaagactatgtatccaacacatgct
ctttccactatgcagtcttctgaaggagctaaggctaaaaaagttgacattgtttgtgat
gctgtgagggcagccatggaaaaatgggatcctcaaaagttttgcttatcaatactcaca
tcttatgtcaggagaacaataccacagttggaaatagcactccagaaggttcatgagcta
agagagagcccttcgactacaatagtcagtgctgatgaagcattgaaatacttactgttc
ttggttgatgtaaatgaactttatgatcattctctggggacgtatgactttgacctagtt
gtgatggtggcagaaaaatcacaaaaggatccaaaagagtatcttccatttttgaacaag
ctgaagaaaatggaaactaattatcagagatacactattgacaagcatttgaaaagatat
aaaaaagcacttagcaatcttagcaaatgtgggccagattatttcactgagttcttgagc
tttgttaaagatcaaagtttgtatacagaagccctagaactttatccacatggaactgtt
gaatataaggccattaatgctgcttatggggatcatcttgtgtctaaacagcagtatgaa
ctagcaggcttgatatatgcccgttgcaatagcattgagaaggcacttgatgcttttatt
gcaagtggcaactggcatcaggtaatgtgtatggcatctcaactggaatactctggggaa
aaaatagctgccctggcaagaactgttgctggtaaacttgtggagcagaggaagcaagca
gatgcagctgtacttctagaacaatatgctgaggactatgaagaagcaattctgttacta
ttagagggtgcacactgggaagaggctttgcgtttgatctacaaatacattcgccttgat
atactggaaacaaatttaaaaccagctctcttagatgctcaaagaaatcacatgatcctc
tttgataaccagaaaactacattcactcgccacaaggagcgtctttctgtggtacgagaa
atgaaggagaaagcccgcctgggtttgctggatgaggatgtgactggttgtgctgaagct
gaccttttctccgataccagcagtattatgactgcaagtgacgcaagtggcaaatattct
caaagcaactcaaggatttcttcgaggtcttcaaagaatcgccgaaaagcagaaagaaag
aagcacagcctaaaggaaggaagtccactggaagacttagcattgcttgaagctcttgca
gaaaccattcaaatggcggataaactaagaggagatgtacataatcttttaaaagtgcta
attctctttgagtatgacgccagggccaaagaacttcagcagaattttgatgatttgctt
ttgctatttgagacgtcaattccagagatctggcccccaagtgtacagcagaatactgca
gcaccaattctaggtcctcactcaactgcaaacagtatttcaatttcctatcagcaccaa
aggaatgtaaacatctcaatgcaagattctgagctattcactgctcccaaacttaataaa
aacatccaatggaaactcagtctacttctgtaa
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