Xenopus laevis (African clawed frog): 735054
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Entry
735054 CDS
T01010
Symbol
samd4a.S, samd4a, smaug1
Name
(RefSeq) protein Smaug homolog 1
KO
K27396
protein Smaug
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
735054 (samd4a.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
735054 (samd4a.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAT_SMAUG
SAM_1
Vts1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
735054
NCBI-ProteinID:
NP_001089983
Xenbase:
XB-GENE-6254504
UniProt:
Q5FWP2
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All DBs
Position
8S:complement(13418445..>13494400)
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AA seq
710 aa
AA seq
DB search
MMFRDQVGMLSGWFKGWNECEQTVALLSLLKRVSRTQARFLQICLEHSLVDCTELHILEG
EANNPAIINQWQQESKDKVISQLLTHLPLLKPGNIDAKMAYMKLLPKILAHSIEHNQHIE
ESRQLLSYALIHPATSLDDRSALAMWLNHLEDRTSGNFSTQSRCRSDSLDYGQMQYYHQR
QNSDDKQNGWPNSRDSGICISSSGWQEKNTGCENGHLPLYSSSSVPSTINAIGTSTILSG
QTHHSSLKRSVSLTPPMNVPNQPLGHGWMSHEDLRARGSQGIPSDHAPLSPQSSVASSGS
GGSEHLEEQSTACNTFQDEGSGMKDVPAWLKSLRLHKYAALFSHITYDEMMSLNECHLEA
QNVTKGARHKIVISIQKLKERHNLLKTLERDVLEGGNLRVPLQELHQIILTPIKACFPQN
SNTEEHDQEADSQPPLLASKNQATESKDSASGGIQQHHIGNCESESGGVPLPESDLPGQF
TRVMGKVCTQLLVSRPDEENISSYLQLIDKCLTHDAFTETQKKRLLSWKQQVQKLFRSFP
RKSLLDVAGYRQQRKTSVDVLIGSRGFGQSNSLPTAGSVGSGIARRNPRQFQIPSRNLPS
TRLSLLGASSLLGATQRASASNPAMLKQGRQNLWFANPGGSNSMPSRSHSSVQRTRSLPV
HTSPQTMLMFQQQDFQVPVTEPDINNRLESLCLSMTEHALGDGVDRTSTI
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgagaccaagtgggaatgctttctggatggtttaaaggctggaacgagtgt
gagcagactgttgctcttctatctctcctcaaaagggtaagcaggacccaagccagattc
ctacagatctgcctggagcattctctggttgattgtacagaactgcacatccttgaagga
gaagccaacaatcctgcaatcattaaccagtggcagcaagaatccaaggacaaagtgata
tctcagttgttaactcacctgcctttactgaagcctggaaacattgatgcaaaaatggca
tacatgaaactactgcctaaaatcctggctcattccattgaacataaccagcatatagag
gaaagccgtcagcttctgtcctacgcattaatacacccagccacctcattggatgatagg
agtgccctggcaatgtggttgaaccacctggaggatcgaacatcaggaaactttagcacc
cagagtcgctgccgctctgattctttggactatgggcagatgcagtattaccaccaaaga
cagaactccgatgacaaacagaacggctggccaaattctcgagattcagggatatgcatc
agttcttctggttggcaagagaaaaacacaggctgtgagaatgggcatttgcctctgtac
tcttcttcctctgtcccttccaccatcaatgctattggaacaagcacaattctctcaggc
cagacacatcacagctccttgaaaagatctgtatcccttactccacccatgaatgtgcca
aaccagcctttaggacatggatggatgtctcatgaggatttacgagccagaggatctcag
ggcatcccctccgatcatgcccccctgtcaccacaaagcagcgtagcttcttcaggaagc
ggtgggagcgagcacttagaagaacagtcaactgcttgcaacacattccaagacgaaggt
agtggtatgaaagatgttcctgcctggcttaaaagtcttcgtctacacaagtatgcagca
ctcttctcccatatcacctatgatgaaatgatgtcgttgaatgaatgtcacctggaggca
caaaatgtcaccaaaggtgcaaggcacaaaatagtcatcagtatacagaagctgaaagag
agacataatctattaaaaactttagaacgggacgtactagaaggaggcaatttacgtgtt
cctctgcaggagttgcatcagataatccttaccccaattaaagcctgctttccacaaaac
tccaatacagaggaacatgatcaggaggcagattctcagccacctctactggcttctaaa
aaccaagcaactgaaagtaaggactctgcttcaggaggaatccagcagcatcatattggc
aattgtgagagtgaaagtggaggtgttcccttacctgaaagtgatcttccaggccagttt
acaagagttatgggtaaagtctgtacacagcttttggtttccagacccgatgaagaaaat
ataagttcttacttgcagttaatcgacaaatgcctcacccatgatgcatttacggagaca
cagaagaagagattgttgtcatggaaacaacaagtgcagaagctctttaggtcttttcct
cggaagtcccttttggatgtcgctggataccggcagcagagaaagactagtgttgatgtg
ctcattggcagccgaggctttggacagtccaactccttaccaacagctggatctgtaggt
tcaggaatagcaagaagaaatcccaggcaattccagatcccttctcgaaatctccctagc
actcggctaagcctgcttggcgcaagcagtcttctaggagcaacacagagggcttctgcc
agcaatcctgccatgttaaagcaaggacgacagaatctgtggtttgcaaacccgggaggg
agtaacagcatgccaagccgatcacacagctctgtacagaggactcgttctctgcctgtc
catacctctccacaaacaatgctgatgtttcaacagcaagatttccaggtaccagtgaca
gagccagatatcaacaataggctggaatccttgtgtctgagtatgacagaacatgccttg
ggtgatggggttgacaggacttcaacaatctag
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integrated database retrieval system
