Xenopus laevis (African clawed frog): 735082
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Entry
735082 CDS
T01010
Symbol
med16.L, med16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
735082 (med16.L)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
735082 (med16.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
735082
NCBI-ProteinID:
NP_001090010
Xenbase:
XB-GENE-967806
UniProt:
Q566H4
A0A974E0T1
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Position
1L:109785184..109797797
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AA seq
697 aa
AA seq
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MDVAYICEWDRRPRTSHCPSIPLVCAWSCRNLIAFTTDQRNEEEKDITNLIHILDTEHPW
DVYSINSGHQEVITCLEWDQSGSRLLSADADGRIKCWGMTDHLANSWQNLVGSEVDGDPI
VALSWLHNGVKLALHVEKSGVSSFGEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVS
LLKPNGQVLTATESLCRLRCRVALADIAFTGGGNIVVATCDGSSTSPVQFYKVCVSVVSE
KCKIDTEILPSLFMRCTTDPARKDKFPAVTHLKFLARDMSEQVLLCASNQCSSIAECWSL
RKEGLPLNNIFQQLSPAVSDKQPMILKWRILSATNELERVSAVALPKLPISLTNTDIKVA
SETKFYPGLGLALAFHDGNVQIVHRLSLQPMAVLYGSSLRPSEEPSLKRQRSPTPCIHFK
ALQMSWTSLALVGLDTQGKLSILRVSPSMGHSLDMSTSLRHLLFLLEYCMVTGYDWWDIL
LHVQPGMVHNLVEKLNEEYTRQNAALQQVLSTRILAMKASLCKLSQTTVTRVCDYHAKLF
LISISCTLKSLLRPHVLNTPDKSPGDRLTEICNKFTDTDIDKVMINLKTEEFVLDMPTLQ
SLQQLIQWLGDFVLYLLVSLPNQGSSVRPGHSFLRDGASLGTLREMMVMIRIWGLLKPSC
LPVYTATSDTQDSMSLLFRLLTRLWLCCPPHNQRLIT
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggcatacatttgtgaatgggacagaaggccacggaccagtcactgcccatca
atcccactagtttgcgcctggtcttgccgcaatcttattgctttcaccacagatcagcgc
aatgaggaggagaaagatatcacaaatttgatccatatccttgacactgagcatccctgg
gatgtctattccattaactctgggcaccaggaggttattacctgcttggagtgggaccag
tctggttcccgcctgctctcagcagatgcagatggtcgaatcaaatgctgggggatgact
gaccacttagccaacagttggcagaatcttgtaggcagtgaggtggatggagatcccatt
gtagctctgtcttggttgcacaatggagtcaaacttgctctccacgttgaaaagtctggt
gtttccagttttggggaaaagttctctcgagtgaagttctccccatctcttactttgttt
ggtggaaagccaatggagggttggattgctgtcacagtcagtggtttggttacagtgtct
ctgctgaagcctaatgggcaggtgctgacggctacagaaagcctgtgccgactacgttgt
cgtgtggcgcttgcagacattgcatttactggtggtggaaacattgttgtggccacgtgc
gatgggagcagcacatctccagtacaattctacaaagtttgtgtttccgtagtaagcgaa
aagtgcaaaatcgacacggaaatccttccttctctctttatgcgctgtacaactgatccc
gcacgtaaggacaagttcccagctgtgacgcaccttaaattccttgcccgggatatgtca
gaacaggttctactctgtgcctccaatcagtgttccagcatagctgagtgctggtctctg
cgaaaagagggtcttccacttaataatatattccagcaactttccccagcagtaagtgac
aagcagcccatgattctgaagtggcgcatcctctcagccaccaatgaattagagcgtgtt
tctgctgtggcactgcccaagctacccatctctctcacaaatactgacatcaaggtggca
agtgaaaccaagttttatcctgggcttggtctagcattggctttccatgatggaaatgtt
cagatagttcacaggctttctcttcagccaatggctgttttgtatggatcttccctgcgg
ccttctgaggaacccagcttaaaacgacagcgttcacctaccccttgcatccacttcaaa
gctttgcagatgtcatggacttcacttgctttggttgggctggatacccagggcaagcta
agtattctgcgagtctctccttctatgggacattccttggatatgtcaacatctctacgt
cacctgcttttcttgctggaatactgcatggtgacagggtatgactggtgggatatactg
ctccatgtgcagcccggcatggtacacaatctagtagagaagttaaatgaggaatacacc
aggcagaatgcagcacttcaacaggttctttccactcggattttggccatgaaggcatct
ctatgtaagctgtctcagaccactgttacccgtgtctgtgattatcatgcaaagctcttc
cttatctccatcagttgtacattaaaatctttacttcgtcctcatgttctcaatactcct
gacaagagtcctggagaccgacttactgagatctgcaacaagttcactgatactgatata
gacaaggttatgattaatttgaagacagaggagtttgtgctggacatgccaacccttcaa
tctcttcagcaacttatacagtggcttggagattttgtactttatctgttggtcagctta
ccaaaccagggttcgtcagtccggcctgggcacagttttttacgtgatggggcatctctt
ggaacattacgtgaaatgatggtgatgattcgaatttggggtcttctaaaaccaagttgc
ctgccagtatatacagcaacttcagatacccaagacagcatgtcactgctattccgcctc
ctgacccgtctttggctgtgctgtcccccacacaaccaaagattgatcacctga
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