Xenopus laevis (African clawed frog): 735086
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Entry
735086 CDS
T01010
Symbol
smarcd3.S, baf60c, cracd3, rsc6p, smarcd3
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 S homeolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
735086 (smarcd3.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
735086 (smarcd3.S)
03036 Chromosome and associated proteins [BR:
xla03036
]
735086 (smarcd3.S)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
735086 (smarcd3.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
735086 (smarcd3.S)
PBAF complex
735086 (smarcd3.S)
GBAF(ncBAF) complex
735086 (smarcd3.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
735086
NCBI-ProteinID:
NP_001090014
Xenbase:
XB-GENE-6254492
UniProt:
Q52L33
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All DBs
Position
9_10S:6826119..6840803
Genome browser
AA seq
369 aa
AA seq
DB search
MMRGPNPGAYRTPMGPYQRPGMLPGSRMPMAGMHMGSPMLPLYGGGSPMRPAMNPMIMEP
FRKRLLTPLGHSPGPSQRRGVKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIA
RKRMEIQEAIKKPLTQKRKLRIYISNTFTPAKPDGEEAERISSWELRVEGKLLEDPSKQK
RKFSSFFKSLVIELDKDLYGPDNHLVEWHRMATTQETDGFQVKRPGDVSVKCTLLLMLDH
QPPQYKLDPRLARLLGVHTQTRANIMQALWLYIKTNKLQDSHEKELINCNRYFRQIFNCL
RMKFSDIPMKLAGLLQHPDPIIINHAISVDPNDQKKTACYDIEVEVDDPLKGQMSNFLAS
TTNQQVALL
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgatgcggggaccaaaccctggagcctacaggacccccatgggcccttaccagagacca
ggtatgcttccaggctcccgaatgccaatggccggcatgcacatgggctcccccatgctt
cctctgtatggtgggggttctcctatgagacctgccatgaatccaatgattatggagcca
tttaggaagaggctgctcaccccactgggacactcccctgggccgagccagcgtagggga
gttaagcgaagaaagatggccgacaagatcttgccacagaggatccgtgaactggtgcca
gagtctcaggcctacatggacctcttggcatttgagaggaagttggatcagactatagct
aggaagcggatggagattcaagaggccatcaagaagcccctcacgcaaaagcgcaaacta
aggatttacatctccaacacgttcactccagccaagcccgacggggaagaggctgaaaga
atcagctcttgggaactccgagtggaagggaagcttctggaagaccccagcaaacagaag
aggaagttctcctccttcttcaagagtctggttattgagttggataaagacctgtacggg
ccggacaatcatctggtggagtggcacagaatggcaaccacgcaggagaccgatggtttt
caggtgaagcgccctggagatgtcagtgtgaaatgcactttgctcttgatgttagaccac
cagcccccgcagtataagttagaccctcgtcttgcacgcctgttgggtgttcacactcag
acccgtgccaacatcatgcaggctctctggctctacatcaagaccaataaactgcaggac
agccacgagaaggagcttatcaactgcaaccgctacttcagacagattttcaactgcctg
cgcatgaagttctctgacattccaatgaagctggcgggattgttacagcacccggacccc
atcataattaatcatgccatcagtgtggaccccaatgaccagaagaagacggcgtgctac
gatatagaagttgaggtcgatgaccctctgaaggggcagatgagcaattttctcgcttcc
accaccaaccagcaggtggcgctgttgtag
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integrated database retrieval system
