Xenopus laevis (African clawed frog): 735158
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Entry
735158 CDS
T01010
Symbol
copb1.S
Name
(RefSeq) uncharacterized protein LOC735158
KO
K17301
coatomer subunit beta
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
735158 (copb1.S)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
735158 (copb1.S)
Membrane trafficking [BR:
xla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
735158 (copb1.S)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
735158 (copb1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
CRAL_TRIO_2
Motif
Other DBs
NCBI-GeneID:
735158
NCBI-ProteinID:
NP_001090083
Xenbase:
XB-GENE-17330846
UniProt:
Q498K6
A0A974HL63
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All DBs
Position
4S:complement(21904957..21919492)
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AA seq
953 aa
AA seq
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MTAAENVCYTLINVPMDSEPPSEITLKADLEKGDVKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVRYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLVELKDHPSHERVLQDLVMDILRVLSTPDLEVRKKTLQLALELVSTRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSNEAAAADV
LEFVREAVQRFDHLRPLIVEKMLEVFHAIKSVKIYRGALWIMGEYCSTKEDINSVMTEVR
RSLGEVPIVETELKKESGELKPEDDVTVGPAQKLVTEMGTYATQSALSSSRPAKKEEERP
PLRGFLLDGDFYVAASLATTLTKIALRYVALVQEKRKQNSFVAEAMLLMATILHLGKSSL
PKKQITDDDVDRISLCLKVLSECSPLMNEIFNKECRQSLSHMLSAKLEEEKLSQKKESEK
RNVTVQADDPISFMQLTAKNETASKEDQFQLSLLAAMGTTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTGDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQAASCSDTEF
RQMWAEFEWENKVTVNTNITDLNEYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIHLGPEASVTGHIRIRAKSQGMALSLGDKINLSQKKSCI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgccgaaaatgtgtgttacactctcattaatgttccaatggactcggaacct
ccatctgaaatcactctgaaggccgatctggagaaaggagatgtgaagtccaagactgag
gctttgaagaaagtgatcatcatgatcctgaatggagagaagcttccgggccttctgatg
accatcatccggtttgtgctgccactgcaggatcacaccatcaagaagcttctcttggtc
ttctgggagattgtgcccaagacaacacccgatgggaaactgttgcaggagatgatcctc
gtgtgtgacgcctacagaaaggatctccagcaccccaatgagttcatcaggggatctaca
ctacgattcctgtgcaaactgaaggaggctgaacttctggagcccctgatgcccgcaatt
cgggcctgcctggagcaccggcacagctatgtgcgtaggaacgctgtgctcgccatctac
accatctaccggaactttgagcacctgatcccagatgctccagaactgattcatgatttc
ctggtgaatgagaaagatgccagctgcaagaggaatgccttcatgatgctcatccatgct
gaccaggaccgggccctggattacctaagcacctgtattgaccaagtgcagacatttgga
gacattttgcagctggtaatcgttgagttgatctacaaggtgtgccatgctaacccttcc
gagagagctcgcttcatccgctgcatctacaaccttctccagtcctccagccctgctgtc
aggtatgaagctgccggaacactggtcaccctctccagcgctccaaccgccatcaaggca
gcggctcagtgctacattgacctgatcatcaaggagagtgacaacaacgtgaagctcatt
gtgttggaccggctggtggagctaaaggaccatccttcccatgagcgtgtgctgcaggat
ctggtcatggacatcctgcgggtgctgagcacccctgatctggaagtgcgtaagaaaacc
ctccagctggcacttgaattggtgtcaacgcgaaacgtggaagagctggtcatcgtgctg
aagaaggaggtcatcaagaccaataatgtgacagagcacgaggacacggacaagtacagg
cagcttctggtgaggactctccactcgtgtagtgtgcgattcccagacatggccgccaac
gtcattcccgtgctcatggaattcctcagcgacagcaacgaggctgcagcggctgatgtc
ctggagttcgtacgggaagccgtgcagcgatttgatcatctccggccgctgatagtggag
aagatgctggaggttttccatgccatcaaatcagtcaagatatacaggggggccctgtgg
attatgggtgaatactgtagcactaaagaagatattaatagtgtaatgactgaagtgcgc
aggtcactgggagaggtgcctattgtagagacagaactcaagaaggaatcgggagaacta
aaaccagaggacgatgtgacggtggggccagcacagaagctggtgacagaaatgggcact
tacgccacacagagcgccctcagcagctcgcggcctgccaagaaagaagaggagagaccc
ccacttagaggcttcttgctggatggggatttctatgttgctgcatctctcgccaccacc
ctgacaaagattgccctgcgatacgtggctttggtccaggagaagagaaaacaaaattcg
tttgtggcagaagccatgttgctcatggccaccatccttcacctcggtaagtcctccctc
cccaagaagcaaatcacagacgacgatgtggatcgtatctccctttgcctgaaggtgctg
tcagaatgttctcccctcatgaatgagatcttcaacaaggaatgtcgccagtccctctcc
cacatgttgtcagccaagctggaggaggagaagctgtcccaaaagaaagagtccgagaaa
aggaacgtgactgttcaagcagacgaccccatatccttcatgcaactgacggccaagaac
gaaacggcctccaaagaggatcagtttcagctcagccttctggctgccatggggacaacc
caaaggaaggaggctgccgatcctctggcctccaaactcaataaagtcacacagctgacg
ggattctcagacccggtgtatgcagaagcctatgtgcatgtcaatcagtacgatattgtc
ttggatgtgctggtggtgaatcagaccggggacacgctgcaaaactgtactctggagctg
gcaacactcggtgatctgaagcttgtagagaagccctcccctctcaccctcgccccccac
gactttgcaaacattaaggctaacgtcaaagtcgcctctacagagaacggaattattttt
ggcaatattgtgtatgatgtgtcgggcgctgccagcgacaggaactgtgtcgtcctgagt
gatatccacatcgatattatggactacatccaagcagcgtcctgctccgacacggaattc
cgacagatgtgggcggagtttgagtgggaaaataaggtgacagttaacacaaacatcaca
gatctgaatgaatatctccagcacattctgaagtctacaaacatgaaatgtctcacccca
gagaaggcactgtctggttactgcggcttcatggctgccaatctttacgcccgctccata
tttggtgaagacgccctcgccaacgtcagcatcgagaagcccattcaccttggaccagaa
gcgtccgtaactgggcacataaggatccgcgcgaagagccaggggatggcgctgagcctt
ggggataagataaacctctcacagaagaaatcctgtatataa
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