Xenopus laevis (African clawed frog): 735237
Help
Entry
735237 CDS
T01010
Symbol
irx1.S, iro, iro1-B, irx1-a, irx1-b, Xiro, Xiro1
Name
(RefSeq) iroquois-class homeodomain protein irx-1-B
KO
K24889
iroquois-class homeodomain protein IRX
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
735237 (irx1.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
735237 (irx1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
735237
NCBI-ProteinID:
NP_001090157
Xenbase:
XB-GENE-6254076
UniProt:
Q2TAQ8
LinkDB
All DBs
Position
6S:complement(57743244..57748197)
Genome browser
AA seq
462 aa
AA seq
DB search
MSFPQLGYPQYLTAGQGAVYGGERPGVLAAAAAAAAAAGRPTGAELGSCPTAAVTSVLGM
YASPYSSPNYSAFLPYTTDLTLFSQMGSQYELKDNPGVHPATFAAHTTPGYYPYGQFQYG
DPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK
KENKVTWGAMGKEDDNIFGSDNEGDHEKNEDDEEIDLESIDIDKIDDNDGEQSNEEEDEK
LDHFRHGEKVSLKKESEVMIPSSDGLKPKDSLSLGKECSDTSNTRIVSPGGQGNIQAPPH
SKPKIWSLAETATSPDGALKSSPPPSQANHTSPQMQHPAFLPSHGLYTCQIGKFHNWTNG
AFLTQSSLINMRSLLGVNPHHAAHHNHHHLQAHQQSTLLATNLGSLSSDRTPERTSPKHS
DRENLPRTESPPQLKPSFQAVREKTFSQQEGTSRILTALPSA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccgcagctgggttacccccagtacctgaccgccggccagggtgcagtctat
ggcggcgaacggccgggcgttttagccgcggcagcagcagcagccgcagcagccggaagg
ccaacaggagctgagctgggcagctgtcctaccgcggcagtcacctcagtgctgggcatg
tatgccagcccgtacagctctcccaactacagcgcctttctgccatacacaaccgatctc
acccttttctcccaaatgggatcgcagtatgaactgaaagacaaccctggtgtccaccca
gctacgtttgctgcgcacactactccaggctattacccctatgggcagttccagtatgga
gacccagggcggccaaagaatgccaccagggagagcaccagcaccctaaaggcttggctc
aacgagcacagaaagaacccataccccaccaagggggagaagatcatgctggcgataatc
accaagatgaccctcacccaggtctccacgtggtttgccaacgccaggaggagactaaaa
aaagagaataaggtcacttggggggcaatgggtaaggaagatgacaacatctttggtagt
gataatgaaggagaccatgaaaaaaatgaagatgacgaggaaatagacttggagagcata
gatattgataagattgatgacaacgacggtgaacaaagcaacgaggaagaggatgagaaa
ctggaccactttagacatggcgagaaagtaagtttgaaaaaggagagtgaggtgatgatt
ccaagttccgacggacttaaaccaaaagactcattgtccctgggtaaggaatgttctgat
accagcaataccagaatcgtaagccctggtggacagggcaacatacaagctccacctcac
agtaaaccaaaaatctggtccttggcagaaacagcaacaagcccagatggggccttgaag
tcttctcctccaccttcccaagccaatcacacatctccccaaatgcagcacccagccttt
ctccccagccatggactatacacatgtcaaattggcaaatttcacaactggacaaacggg
gcttttctcacacagagctctctgataaacatgagatccttgttgggagtaaaccctcac
catgcggctcaccataaccaccaccaccttcaggctcaccaacaatctacattgttagca
acaaacctgggttccctcagtagcgacagaactccagagaggaccagtcccaagcactca
gacagagaaaatttacccagaaccgaatcaccacctcagttaaaaccttccttccaagct
gttcgtgaaaagaccttttcccaacaagaaggcacctctcgtatactgacagcacttccc
tctgcctga
DBGET
integrated database retrieval system
