Xenopus laevis (African clawed frog): 735244
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Entry
735244 CDS
T01010
Symbol
supt20h.S, fam48a, fp757, p38ip, spt20, supt20h
Name
(RefSeq) SPT20 homolog, SAGA complex component S homeolog
KO
K21245
transcription factor SPT20 homolog
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
735244 (supt20h.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
735244 (supt20h.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
735244 (supt20h.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
735244
NCBI-ProteinID:
NP_001090164
Xenbase:
XB-GENE-993445
UniProt:
Q2T9H8
LinkDB
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Position
2S:143502604..143562576
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AA seq
815 aa
AA seq
DB search
MQQILELALDRTEYVIESARQRPPKRKHSSGGRKSVFHKLYDLYIEECEKEPEIKKLRRN
VNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIHLPYEEGELLEYLDAEEL
PPILVDLLEKSQVNIFHCGCVITEIRDYRQSGNLKSPTYQSRHILLRPTMQTLISDIHAI
TNDNHKWTQEDKLLLESQLILATAEPLCLDPSVSVTCTANRLLFNKQKMNTCPMKRCLKR
YSRPSVNRQQEMSNCPTPPQLKLLDFLHRRKERKPLQPQIDLKISKTGNCLDIWKPNYSA
LTVPLEVDVEKYAKVEKSIKLDDSSPTVWPADEMKEDFIFECENGSPFQKAKLTVFQNVG
NPLYFGELQTFKSHDENDYNLPHSQFPIGSKFEIDRIVSQYLDLFEIETKSVVKLSHSTA
PSISLHQLSPGKETESDSIAGSIQSSVLGKGVKHRPPPIKLPPGSASSSSGNMFSSLLAS
GHLKSTTPPPNKPPSISRKQPVDHNQVGMLSPVALSPASSSQRSGTPKPSTPTPTNTPSS
TPHALDALNSTLITPSVTPTPQDSSFNSQATLLTPFAQQQMSLGQGLPVMTIPLPTMVTF
ITTGTTSTQVMANPTGLNFINVVGSVCGPQTLMSGSSPILGCNTGAITPAGINLSSILPS
GGLVPGTLPAAMQSASQAGGPFGLKNTSGLRPLNLLQLSGAPILFNPMQQQQQQQQVSQF
SPQQPQQTLTSSPQQQAEQLGLLPSGMDQGSSNQDQTLSAQQAAVINLTGVGGFMPPQAA
VAILASSNAAANGYGNSSTSSPVPTPASFRQPIKK
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagattttggaattggcactggatcgcactgagtatgtcattgagagtgcaaga
cagaggcctccaaaacggaaacattcatctggaggaaggaaatccgtgtttcataagtta
tatgacttgtacattgaagaatgtgaaaaagagccagaaataaagaagctgagacgaaat
gtgaacttgctggagaagctagtaatgcaggagactctctcttgccttgtggtcaatctg
tatcctggaaatgaagggtactctcttatgcttcgaggaaaaaatggatcagattctgaa
acaatccatcttccctacgaagaaggagaactcttggaatatctggatgctgaagaattg
ccaccaattttagtagatttgctggaaaaatctcaggttaatattttccattgtgggtgt
gtcattactgaaattcgtgactacaggcagtctggcaacttaaaatctccgacataccaa
agcaggcatattctcttacgaccaacaatgcagactttgatttcagacatacatgccatc
accaatgacaaccataaatggacacaggaggacaagcttttgctagagagccagttaatt
ttggcaacagcagagcctttatgccttgatccctctgtatctgttacctgtactgcaaac
cgcctgttgttcaacaagcagaagatgaacacatgtccaatgaagaggtgtttgaagagg
tattccagaccatctgtaaatagacagcaagaaatgtcaaactgccccaccccacctcag
ctgaaactgcttgactttctacataggagaaaggaaagaaaacctctgcagcctcagatt
gaccttaaaatatccaaaactggaaattgtttagacatatggaaaccaaactacagcgct
ttaactgtaccattggaagtggatgttgaaaaatatgcaaaagtggaaaaatctataaaa
cttgatgattcttcacctactgtctggccggcagatgagatgaaagaggatttcatattt
gaatgtgaaaatggcagcccattccagaaagcaaagctgaccgttttccagaatgtaggc
aatcctctctactttggcgaattgcagactttcaaaagccacgacgagaacgactacaac
ctcccccactctcaatttccaattggatctaagtttgaaattgacaggattgttagtcag
tatcttgacttgtttgaaattgaaaccaaaagtgttgtgaagttgagtcatagcaccgca
ccttcgatcagccttcatcagctttctcctggcaaagaaactgagtctgacagtatcgct
ggttctattcaatcctctgttttgggaaaaggtgtcaagcacaggccacctcccataaaa
cttcctccaggctctgcatctagttcatcaggtaatatgtttagttccctgctggcaagt
ggccatctgaagtccacaacccctcctcccaataagcccccaagtatctctcggaagcag
cccgtggaccacaatcaggttggaatgctttctccagtggcattgtcccccgccagctct
tcacaaaggtctggaactcccaaaccatctactcctacaccaaccaacaccccatcatcg
actccgcatgctcttgatgctttgaactcaactcttatcaccccttctgttacccctaca
ccccaagattcaagctttaattcacaggccactttgttaactccatttgctcagcagcaa
atgtctctgggtcagggcttgcctgtaatgaccatcccactacccaccatggtaacattt
atcactacagggaccacctccacccaggtcatggcaaatcctactggactaaacttcatc
aatgtagttggctctgtatgtggtccacagacactgatgagcggatcaagtccaatactg
ggatgtaacactggtgccattacccctgcagggatcaatctgagcagcattttaccatca
ggagggctagtgccagggacattgccggctgccatgcagtcagcctcacaggcaggtggc
ccatttggcttaaaaaatacttcaggtctaaggcccttaaatctgctgcagctttctggt
gctccaatcctattcaaccccatgcagcagcagcagcagcaacaacaagtctcccaattt
tcacctcaacagccccaacagactttgacttccagcccacaacagcaggcagaacagttg
ggacttttaccttcgggaatggaccaaggttctagcaaccaagatcagactttatcagct
cagcaggctgcagttattaacttaaccggagtaggcggcttcatgcctccccaagcagct
gttgcaattcttgcatcatcaaatgcagcagcaaatggctacggcaacagcagcacaagc
agccccgttcccacccctgcctcattccggcagccaatcaagaagtaa
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