Xenopus laevis (African clawed frog): 779055
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Entry
779055 CDS
T01010
Symbol
papola.S
Name
(RefSeq) poly(A) polymerase alpha-A isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
779055 (papola.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
779055 (papola.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
779055 (papola.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
779055 (papola.S)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
779055
NCBI-ProteinID:
XP_018087880
Xenbase:
XB-GENE-17332401
UniProt:
A0A1L8F081
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Position
8S:complement(19223620..19267300)
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AA seq
731 aa
AA seq
DB search
MPFPLVSQGSQQSQKTFGITSPISLAAPKDTDCTLTQKLIETLKPYGVFEEEEQLQHRIL
ILGKLNNLVKEWIREISELKHLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRH
VDRSDFFSSFYEKLKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLD
LRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGF
LGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR
VNPSDRYHLMPIITPAYPQQNSTYNVSVSTRAVMIEEFKQGLAITDEILLGKAEWSKLFD
APNFFQKYKHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPRSFPA
PSENMEKEEFRTMWVIGLVFKKMENSENLSVDLTYDIQSFTDTVYRQAINSKMFETEMKI
AAMHVKRKQLHQLLPSHVLPKKKKHSFEGVKLLSLNDSSIDLSVDSDNSMSVPSPTNATR
TSPLNSSGLSQGRNSPAAPVSFSVTNVQATDVMVPQNNSTENLGGSLNESIPETATHPGF
SSTPKPLVTRVVSSMRLVNQLQKPVSNTITKMPSPVAGVKRTSSPSNEDIPKKNKTEEDE
NDSSISADVDEQNKLETEELKEVHSEAKSSSPVPGSLPSSQQSSTDLSDISVLPATPIPV
IKNSIKLRLNR
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttcctctagtgagccagggatcacagcagtcacagaagacctttggtattact
tcacctataagtttagccgcacccaaagatacagattgtaccctcacgcaaaaactaatt
gaaaccttaaaaccttatggagttttcgaagaggaagagcagttgcagcatagaatttta
attttggggaaattaaacaacttggtaaaagaatggatccgggaaatcagtgagctcaag
catcttccacagtctgtcattgaaaatgtaggtggaaagatttttacttttggatcatac
cgattaggtgttcatactaaaggtgctgatattgatgctctctgtgttgctccaaggcat
gttgatagaagtgactttttttcatctttttatgagaagttgaagcagcaggaagaagtc
aaagatttgagatctgttgaagaagcatttgtaccagtgattaaattgtgctttgatggg
atagagattgatatcctatttgcaagacttgcactgcagacaatacctgaggatttagac
ctccgagatgacagcctgctgaaaaatttagacatacgatgtatacgtagtctgaatggt
tgccgagtgactgatgaaattcttcatttagtaccaaacatagacagcttcaggttaact
ctcagagcaatcaaattatgggccaaacgtcacaacatctactcaaatatacttggtttt
cttggcggtgtttcatgggctatgttggtagcaaggacatgccaactatatccaaatgca
attgcatcgactcttgttcataaatttttcctagtgttttcaaaatgggaatggcctaat
cctgtgctactgaagcaaccagaagagtgcaatctgaatttacctgtctgggatcctagg
gtgaatcccagtgataggtaccaccttatgcctataatcacaccagcctaccctcagcaa
aattctacatacaatgtttcggtgtcaactcgcgcagttatgattgaagagttcaaacaa
ggactggccattacagatgaaatcttgcttggtaaagcagagtggtccaaactttttgat
gctcccaacttctttcaaaagtacaagcattatattctcctacttgcaagtgcaccaacg
gaaaaacagcggctggaatgggtaggcttggtagagtcaaagattcgcattcttgttgga
agtttagagaaaaatgaattcattacactggctcacgttaaccctcggtcattcccagca
ccttctgagaacatggaaaaggaagaattccgtacaatgtgggtcatagggctagtgttt
aagaaaatggaaaattccgaaaatttgagtgttgatctaacttatgacattcagtctttc
actgacacagtgtaccggcaggccattaacagcaaaatgtttgaaactgaaatgaaaatt
gctgcaatgcacgtcaagaggaagcaacttcatcaactgcttcctagtcatgtgctcccc
aaaaagaaaaagcattcatttgaaggtgtaaaactgttatctctgaatgacagcagcatt
gatttatcagtggacagtgacaacagcatgtctgtgccttctcctaccaatgccacaaga
accagtccactaaattcttctggattgtctcagggcagaaacagcccagcagcaccagta
tccttttctgtgaccaacgtccaggctactgatgtgatggtgccacagaataattccact
gaaaatttagggggtagtttgaatgaaagcattcctgaaactgccacacacccaggtttt
tcttcaacgccaaaacctttggtgacccgagttgtttcttccatgcgtttggttaaccaa
cttcaaaagcctgtctcaaacacaattacaaaaatgcccagtccagtggcaggtgtgaaa
aggacatcttctccttcgaatgaagacatccccaaaaaaaacaaaacagaggaggatgaa
aatgatagcagtatttccgcagatgtggatgaacaaaacaaattagaaactgaagaacta
aaggaagtccatagtgaagcaaaatcctcatcccctgtgccaggttcactgccatcctct
cagcaatcaagtacagatctgtctgatatttctgtcctccctgctactcctattcctgtt
atcaagaattcaataaaactaagactgaaccgataa
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