Xenopus laevis (African clawed frog): 779060
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Entry
779060 CDS
T01010
Symbol
pou2f1.L
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
779060 (pou2f1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
779060 (pou2f1.L)
03021 Transcription machinery [BR:
xla03021
]
779060 (pou2f1.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
779060 (pou2f1.L)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
779060 (pou2f1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
779060
NCBI-ProteinID:
XP_018101328
Xenbase:
XB-GENE-17345040
UniProt:
A0A8J0UC19
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All DBs
Position
2L:complement(6465901..6563406)
Genome browser
AA seq
750 aa
AA seq
DB search
MADGGAASQDESSAAAAAADARMNNPSETSKSSESGDGNTGTQTNGLDFQKQAMPIGAIT
SAQAQALLGHLHQVQLAGTSLQAAAQSLNVQTKFKEEPGEPMQVGQPSQHPSLQAAIPQT
QLMVAGGPITGLTLTPAQQQLLLQQAQAQLLAAAVQHSASQQHSAAGATISASAATPMTQ
IPLSQPIQIAQDLQQLQQFQQQNLNLQQFVLVHPTTNLPPAQFIISQTPQGQQGLLQAQN
LLTQLPQQSQANLLQSQPSITLTSQPATPTRTIAATPVQQLPQSQTTPKRIDTPSLEEPS
DLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLK
PLLEKWLNDAVLENITDSTLTNQSVLNSPGHGMEGLNRRRKKRTSIETNIRVALEKSFLE
NQKPNSEEITMISDQLNMEKEVIRVWFCNRRQKEKRINPPSSGGSSSSPIKSLFSSPLVA
TTPSLVTSSTAATLTVNPVLPLTSAAAITGFSVPGTTGTPSANTATVISTAPPISSVLSP
SPSATAATSEASTASETNTTQTTSTPMTSPLSTGQVMVTASGIHAATALQGAAQLPTNAS
LAAMAAAAGLNPGLMAPSQFTAGGALFSLNPGALGSALSPALMSNSTLATIQALASSGSL
PITSLDASGNFVFANAGGTPNIVTAPLFLNPQNLSLLTSNPVSLVSAGATGPITSLHATT
SSIDSIQNTLFTMASASGAASTTTSASKAQ
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcagcggcggcggcagcagcagat
gcaagaatgaacaatccgtcagaaacaagtaaatcatcagagagcggggatggaaacaca
ggcacccaaacgaatggcctggactttcagaaacaagcaatgcccattggagccatcacg
tcggctcaagcacaggctttgctcggacaccttcaccaggtccaactcgctggcacaagt
ttacaggctgctgcacagtccttaaatgtacagactaaatttaaagaagagcctggggag
ccgatgcaagtgggccagccttcccagcatccctcacttcaggcagccatcccccagact
cagctcatggtagctggaggaccaatcactgggctgacactgacgccggcccaacagcag
ctgctactccagcaggcccaggcccagttacttgcagccgcagtgcaacattctgctagc
cagcaacacagcgctgccggggctacaatctcagcttctgcggccactccaatgacacag
attcccctgtctcagccaatacagattgcacaggatctacagcagttgcagcagtttcaa
caacaaaatcttaacttgcagcaatttgtgttggtgcatccaaccaccaacctgccgcca
gcgcaattcatcatctcacagacgccgcaggggcagcaaggcctcctgcaggcgcagaat
ctcttaactcaactacctcagcaaagccaagccaacctcctgcagtctcagccaagcatc
accctcacctcacagccagcaacccccacgcgcacaatagctgcgacccctgtacagcaa
cttccacagagccagacgacaccaaagcgaatcgacaccccaagcctggaggagcccagc
gaccttgaggagcttgagcagtttgccaagacatttaaacagagacgcatcaaactcgga
ttcactcagggtgatgtggggcttgctatgggcaaactctatggaaatgacttcagccaa
actactatatcccgcttcgaagccttgaaccttagctttaaaaatatgtgcaaattaaag
cctcttctggaaaagtggctcaatgacgccgttttagaaaacataactgactctaccctg
accaaccaaagtgttctgaactcgccaggacacggaatggaagggctgaaccgcaggagg
aagaaacgcaccagcatagagaccaacatacgagtggccttagagaagagtttcctggag
aaccaaaagcctaactcggaggagatcaccatgatttcagaccagctgaacatggagaaa
gaagtgatccgtgtctggttctgcaaccggcgccagaaagagaaaaggataaaccccccg
agcagtggtggatccagcagttctcccattaaatcactgttctccagtccactggtggcc
actaccccaagccttgtgaccagtagtacagcagccacactcactgtaaacccagtgctc
ccgcttacaagtgctgctgctataaccggattttctgtcccaggcacaacaggaactcct
tcggctaacacagcaactgtgatctcaacagcgccccccatatcctcggtcctaagtcct
tccccctcagctactgcggcaacatccgaagcatctacagcaagcgagacgaatacaacg
caaaccacatccactccaatgacctctccattaagcactggccaagtcatggtgactgca
tctggaatccacgcggctacggcactacagggtgcagcacagttgccgaccaatgcaagt
cttgctgccatggctgctgcagcaggactgaaccccgggcttatggcgccctcacagttt
accgctggaggtgccttatttagcctcaatccaggggcactggggagcgcccttagccct
gctctcatgagtaacagtacactggcgacaattcaagctcttgcatctagtggatctctt
ccaataacatccctggatgctagtgggaactttgtctttgccaacgctggagggacccct
aacattgtgactgcccccttattcctcaatcctcagaatctctctctgctcaccagcaat
cctgttagtttggtctcggctggagctactggccccatcacaagccttcatgccaccacc
tcatcgatcgattccatccaaaacacactatttaccatggcctctgctagcggagctgct
tccaccaccacatcggcctccaaggcgcaatga
DBGET
integrated database retrieval system
