Xenopus laevis (African clawed frog): 779073
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Entry
779073 CDS
T01010
Symbol
vsx1.L, ktcn, ppcd, ppd, rinx
Name
(RefSeq) visual system homeobox 1
KO
K09335
visual system homeobox protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
779073 (vsx1.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
779073 (vsx1.L)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
779073
NCBI-ProteinID:
NP_001090191
Xenbase:
XB-GENE-866467
UniProt:
Q0P031
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Position
5L:37250175..37254352
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AA seq
344 aa
AA seq
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MTGRDDISEAKSKGKILAPSVGNEKSGRLHGPAMRSKGFAITDLLGLEAELQPPSISLPN
CEGPGVSLGGVSLTNGSLPLGLGFLCGFASQQPPGTTCLLPTHIPFLQPRPDHHYLHTSD
KHKENISDDDSILGDKNDLKASSAQSKRKKRRHRTVFTAHQLDELEKSFNEAHYPDVYAR
EMLALKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMVRHSIPLPESIIN
SAKNGLVGSCAPWLLGMHKKSVDITSKVDADDLVTERSRGESQVRDFTNPHSESHRSPRH
HSHSMDISEERAIDLSSTAKQENQSSGRHNSIRDSQSDFTDSDH
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggcgagatgacatctcagaagcaaaatcaaagggcaagatcctggcacccagt
gtgggaaatgagaaatcggggaggctccatggacctgcaatgagatccaaaggctttgcc
atcactgacctgcttggtctggaagcagagttgcagcccccatcaatatctttgcccaac
tgtgaaggtccaggagtcagtctaggtggggtatccctgactaatggctctctcccactt
ggactgggctttctgtgtggctttgcatctcagcagccccctgggactacatgccttctc
ccaactcatatcccttttctacagcccaggccggaccaccattatctccatacttcagac
aagcacaaggaaaatatttcagatgatgacagtatactgggagataagaatgacctgaag
gcatccagcgcccaatcaaaaagaaagaaaagaagacacaggactgtgtttactgctcat
cagctggacgaattagaaaaatctttcaatgaagctcattatccggatgtgtatgccaga
gaaatgttagcactaaagacagagctccctgaggacagaatacaggtttggttccagaac
agaagagctaagtggaggaagcgtgaaaagtgctggggcagaagcagtgttatggcagaa
tatggtctctatggagccatggtgagacactccattcctctaccggaatccattatcaac
tcagccaagaatggacttgtgggttcctgtgctccgtggcttctcgggatgcataaaaag
tctgttgacatcaccagtaaagtggacgccgatgacctggtaacagagcgttccagggga
gagtcccaggttcgtgatttcacaaacccacattcagaatcccacagaagcccacggcat
cacagccactcaatggacatttcagaagagagagccattgatctctcaagcaccgcaaaa
caagagaaccaatctagcgggagacacaactctattagagacagtcagagcgactttact
gacagtgaccactga
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