Xenopus laevis (African clawed frog): 779085
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Entry
779085 CDS
T01010
Symbol
limd1.L, limd1, xlimd1
Name
(RefSeq) LIM domain-containing protein 1
KO
K16682
LIM domain-containing protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
779085 (limd1.L)
03036 Chromosome and associated proteins [BR:
xla03036
]
779085 (limd1.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
779085 (limd1.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
779085 (limd1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
779085
NCBI-ProteinID:
NP_001090194
Xenbase:
XB-GENE-1017241
UniProt:
Q06BR1
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Position
6L:complement(69038060..69068978)
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AA seq
612 aa
AA seq
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MDTYDELSLEASKFIQDLTLYEASKDGLFRVDKGLSNNPEFEETKRIFAAKMAKIHLQNQ
QKSIPDTGISEGNGLTHQYNYSLPKSVEEGPVIYNGLSNSSVGPSDYKTYRESYKGKPDI
DSADRSEESVFKHDSEIMLPSPLGKVGNTIPTQQFTSKKAISPSIESLERERTIKNNITG
FENYRLCNSSSMKNCKPHQNSRHGEVEDTMAENFTENKTPFKQCSALISSSVTFGDDTHT
NIPQKKLFNLPSTSSINTQNNSDDVYLSKTNAAKEFHGEQRGLCSTNSLGFGNPNDVISA
SYCVGYNDNFPGEIKQKQSPHYTFHSGHSSVDEQPQAIPFCCKDSSGQGPASTIDSDHTD
ILQDSSALMKIKLPCQTLSQSSKQGSSKAEKKLEAITRHVEQEMDAHNKADYFGTCVKCS
KGVYGASQACQAMGNLYHNGCFICSACSRKLRGKAFYFVNGKVYCEEDFLYSGFHQSADR
CFVCGHWIMDMILQALGKSFHPGCFRCVVCNECLDGVPFTVDMENKIYCVKDYHKILAPK
CAVCSLPILPSEGTDETIRVVSMDKDYHIDCYRCECCALELNNEDDHRCYPLDGHLFCHN
CHLKYLENHNLS
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggatacatatgatgaactaagcctggaagcaagcaaattcatacaagatttgacttta
tatgaggcgtctaaagatggactttttcgcgtggataagggactaagtaacaaccctgaa
tttgaagagacaaaaaggatatttgctgccaagatggcaaaaattcatcttcagaatcag
cagaaaagtattccagacactggcataagtgaaggtaatggtttaactcaccagtacaat
tattcattgcctaaaagcgtagaagaaggcccagtcatctataatggtctatctaattct
tcagtaggtccatctgattacaaaacatacagagagtcttataaaggtaaacctgatatt
gattctgctgatagatctgaagagtctgtgttcaaacatgacagtgaaatcatgttacct
agtccacttggtaaagttggcaatactattcccactcaacagtttacttctaagaaagct
atcagtccaagtattgagagcttggaaagagaaagaacaataaagaacaatattactggc
ttcgaaaattacagattatgtaattcttcatcaatgaaaaactgcaagccacatcaaaac
tcaagacatggtgaggttgaagataccatggcagagaatttcactgaaaacaagacacct
tttaagcaatgttcagctttaatttcatcatcagttacttttggagatgatactcataca
aacattccacagaagaagttgtttaacttgccatcaacaagctctattaatacgcagaac
aattctgatgatgtatatctgtctaaaacaaatgctgcaaaggagtttcatggggagcag
agagggttatgtagtactaattctcttggttttggaaacccaaatgatgtcataagtgct
tcatactgtgtcggatataatgataatttccctggtgagataaaacagaagcaatcacct
cattatacatttcattctggacacagctctgttgacgaacagccacaggccattcctttt
tgttgtaaagactcctcaggacaagggccggcctccaccatagattctgaccatacggat
atattgcaagatagctctgcactgatgaaaataaaactaccctgtcagactctttctcag
agttcaaaacaagggtcatctaaagctgaaaaaaaacttgaagctataacaaggcatgta
gagcaggaaatggatgcccataacaaggctgattattttggaacgtgtgtaaaatgcagc
aaaggagtttatggggcaagtcaagcttgccaagcaatgggaaacctataccacaacggt
tgttttatctgcagtgcctgtagtagaaaactcagaggaaaagcattttattttgtcaat
ggtaaagtgtattgtgaagaagactttttgtattctggattccatcagtcagcagacagg
tgctttgtgtgtggacactggatcatggatatgatcttacaagccctaggtaaatcattt
catcctgggtgtttccgctgtgtggtttgtaatgaatgtttagatggcgtgcctttcact
gtggacatggaaaacaagatctactgtgtgaaagattaccacaagattttagctccaaaa
tgtgccgtatgcagtcttccaattctaccatctgagggcacagatgaaaccattcgtgta
gtgtccatggataaagattaccatatagactgttaccgttgtgagtgctgcgctttggaa
ttgaacaatgaagatgaccaccgatgttatcctctagatggacatttgttttgtcataat
tgtcatttaaaatacttggagaatcataatctgtcataa
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