Xenopus laevis (African clawed frog): 779102
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Entry
779102 CDS
T01010
Symbol
irx4.L, iroquois-4, irx4, irx4-a, irx4-b, irxa3, Xiro4
Name
(RefSeq) iroquois-class homeodomain protein irx-4-A
KO
K24889
iroquois-class homeodomain protein IRX
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
779102 (irx4.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
779102 (irx4.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
SID-1_RNA_chan
Motif
Other DBs
NCBI-GeneID:
779102
NCBI-ProteinID:
NP_001090204
Xenbase:
XB-GENE-865388
UniProt:
Q90XW6
A0A974CP08
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Position
6L:complement(70807645..70817160)
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AA seq
496 aa
AA seq
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MSYPQFGYPYSSTPQFLMTTNSLSTCCESSGRSLSDSAAAASAQTPVYCPVYESRLLATA
RHELNSAAALGVYGNPYTSTQGYGNYVTYGADASAFYSLNAFESKDGTGSAHAGIPQTAA
YYPYEHTLSQYQYDRYGTMDGSSRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKCSDEKRPYDEEEEEEEEEEDSQKATIKN
EKKTVDEEVVREDKALDLSDLEDFDTIESESSECELKQPFHHQPQDGHQLRQRDCVNDHC
KDVILKMPLNSTVNQELDRTNICLKSGVDQCEQDVLRGRQRSGESKACFQQQQILDSKPR
IWSLAHTATSLNQTEYPSCMLKHQGLSSPSSSSSSSAVSTPVCVIDRRQDSPVTSLRNWV
DGVFHDPLFRHSTLNQALTNTTVSWATTKGTLIDSGSLGRSVGNPTNVKGQLPNIPHDTN
KEFIAFQKSGSKMFCS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatcctcagtttggctacccatattcctccacacctcagttcttgatgaccacc
aattcactttcaacctgttgcgaatccagtggaaggagtctgtccgactcagccgctgca
gcttcagcccagaccccggtctattgcccagtgtacgagagcagattgctggccactgcc
aggcatgagctcaattctgctgcagctttgggtgtctatgggaacccttataccagcacc
caaggctatggaaactatgttacctacggagctgatgcctctgccttttattccctgaat
gcattcgagtcaaaagatggtacaggatctgcgcatgcgggaattccccagactgctgct
tactacccctatgagcacacactcagccagtaccaatatgacaggtatggtaccatggat
gggagctctcggagaaagaacgccacccgtgagaccaccagcaccctgaaagcctggctg
caggagcacaggaagaacccgtaccccaccaagggggagaagatcatgctggccataatc
accaagatgaccctcacccaggtctccacgtggtttgccaatgccagaaggaggctaaag
aaggagaataagatgacctggcctccaagaaacaaatgctcagatgaaaagaggccttat
gatgaagaggaagaagaagaagaagaagaggaagattcccagaaggccaccatcaagaac
gagaaaaaaacagttgacgaggaagtggtcagggaggacaaagcactagatctaagtgat
ctggaggattttgacacaattgagtctgaaagttctgagtgtgaactgaaacaacccttt
catcaccagccccaagatgggcaccaactgaggcagagagattgtgtcaacgatcactgc
aaagatgttattctgaagatgccactaaattccacggtcaatcaagaactggacaggaca
aatatctgcctcaaatccggggttgaccaatgtgaacaagacgtactaagaggaagacag
agaagtggtgaatctaaggcttgcttccaacaacagcaaatcctggattccaaaccaaga
atatggtccctagcccacacagccacctcattaaatcaaactgagtacccgtcttgcatg
ttaaagcaccaaggcttgtcttctccttcttcttcttcatcctcttctgcagtctccaca
ccagtttgtgtcattgacagacgtcaggattctccagtgacaagcctcagaaattgggtg
gatggtgtttttcatgatccattgtttagacacagtactttgaaccaggctctcaccaat
actacggtttcgtgggccacgaccaaaggaacactgattgactctggctccttgggacgt
tctgttgggaacccaactaatgtcaagggacagctgcctaacataccccatgacacaaat
aaggagtttattgcattccaaaagtctggaagcaagatgttctgttcctaa
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