Xenopus laevis (African clawed frog): 779188
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Entry
779188 CDS
T01010
Symbol
smg1.L, smg1
Name
(RefSeq) SMG1 phosphatidylinositol 3-kinase-related kinase L homeolog
KO
K08873
serine/threonine-protein kinase SMG1 [EC:
2.7.11.1
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
779188 (smg1.L)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xla01001
]
779188 (smg1.L)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
779188 (smg1.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
779188 (smg1.L)
Protein kinases [BR:
xla01001
]
Serine/threonine kinases: Other
PIKK family [OT]
779188 (smg1.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
779188 (smg1.L)
mRNA cycle factors
Common to processing body (P body) and stress granule
779188 (smg1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FATC
P4Ha_N
Cdh1_DBD_1
Fzo_mitofusin
SlyX
Motif
Other DBs
NCBI-GeneID:
779188
NCBI-ProteinID:
NP_001090280
Xenbase:
XB-GENE-6252967
UniProt:
Q4KMW3
LinkDB
All DBs
Position
9_10L:103582015..103589423
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AA seq
280 aa
AA seq
DB search
MMSNQRSLQGEKEQQIETLCELTQNLVDSIKNVLTGHNKQLGEVKHLLKAMAKDEEAAMA
DGEDVPYENSVRQFLCEYKSWQDNIQTVLFTLVQALGQVRSQEHIEMLQEITPTLKELRN
QSQSIYNNLVSFASPLVTDATNECSSPTTSSTYLPSFAAAVRSNTVQKTQPEGMSQNAKK
PVQRNLATSADTPPSAVPGPGKSVASSPKKAVRDPKTGKAVQERNSYAVSVWKRVKAKLE
GRDVDPNRRMSVAEQVDFVIKEATNLENLAQLYEGWTAWV
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaaatcaaagaagtctgcagggtgaaaaggagcaacagattgaaacactgtgt
gaactgacacagaacctggtggactccataaagaatgttctcaccggccacaacaaacag
cttggagaagtcaaacatttgctgaaggccatggcaaaggatgaggaagctgccatggct
gatggtgaggatgttccttatgagaacagtgtgagacaatttctgtgtgaatacaaatca
tggcaagacaacatccagactgtgctgtttacattagttcaggctttgggacaggttcgc
agtcaagaacatatcgaaatgctgcaggaaatcaccccgaccctgaaggaactccgaaat
caaagccagagcatctataacaacctagtgagctttgcatctccattggttaccgatgca
acaaatgaatgttcgagtccgaccacatcatcaacatatctgcccagctttgctgcagct
gtgcgtagcaacactgttcagaaaactcagcctgaaggtatgtcccagaatgcaaaaaag
cctgtgcaacgaaatctggccacatctgcggatactccaccgagcgctgtcccaggccct
ggcaaaagcgttgcttccagtcccaaaaaggctgtcagggatcctaaaacaggaaaagct
gttcaagaaagaaattcctacgcggtcagtgtgtggaagagagtcaaagccaagctggaa
gggagagacgtggatccaaacagaaggatgtctgtcgctgagcaggtggactttgtaata
aaggaggcaacaaacctagaaaacctggctcagctgtacgaaggttggacagcctgggtg
tga
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