Xenopus laevis (African clawed frog): 779382
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Entry
779382 CDS
T01010
Symbol
psmc6.S, cadp44, psmc6, psmc6-a, sug2
Name
(RefSeq) proteasome 26S subunit, ATPase 6 S homeolog
KO
K03064
26S proteasome regulatory subunit T4
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
779382 (psmc6.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
xla03051
]
779382 (psmc6.S)
Proteasome [BR:
xla03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
779382 (psmc6.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_5
AAA_2
AAA_22
PRS7_OB
RuvB_N
nSTAND3
AAA_14
DUF815
AAA_33
AAA_7
Prot_ATP_ID_OB_N
AAA_11
TIP49
RNA_helicase
AAA_3
NPHP3_N
Csa3_N
AAA_18
Mg_chelatase
TPR_MLP1_2
bpMoxR
AAA_28
AAA_lid_PRS2_C
DUF5906
TsaE
AAA_24
DUF3829_2nd
ATPase
NACHT
AAA_25
Occludin_ELL
ATPase_2
AAA_17
Parvo_NS1
IstB_IS21
DUF4140
Med4
Motif
Other DBs
NCBI-GeneID:
779382
NCBI-ProteinID:
NP_001090469
Xenbase:
XB-GENE-978105
UniProt:
Q4QR39
LinkDB
All DBs
Position
8S:complement(14266093..14279553)
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AA seq
389 aa
AA seq
DB search
MADPREKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKAGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGK
TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IELPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHD
FVVQEDFMKAVRKVADSKKLESKLDYKPV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccctcgggagaaggcgctgcaggattacaggaagaaattgctggagcacaag
gagatagatggccggctgaaggaattaagagaacaattgaaggagctcaccaaacagtat
gagaagtcagagaatgaccttaaagcactgcagagcgttgggcagattgttggggaagtt
ctaaagcagctaactgaagaaaaatttattgttaaagcaacaaacggtccaagatatgtc
gttggttgtcgtcggcagcttgacaaaagtaaactgaaggctggaacaagagttgcacta
gatatgactactctgactataatgcgttatttaccacgagaagtggatcctcttgtgtac
aacatgtctcatgaggaccctggaagtgtgtcatactctgaaataggtggactttctgaa
caaatccgagaacttcgagaggtaattgagttgccacttacaaaccctgaattgtttcag
cgtgtaggaattatacctccaaagggctgtcttctctatggcccaccaggtactggaaaa
actctacttgcaagagctgttgccagtcaactggattgcaatttcttaaaggttgtgtct
agttcaattgtagacaaatacattggggaaagtgcaagactaattcgcgaaatgtttaac
tatgccagggaccaccagccatgtataatttttatggatgaaattgatgccattggtggg
cggcggttttctgaagggacctcagctgacagagaaattcagagaactctaatggagttg
ttgaatcagatggatgggtttgatactttgcatagagtaaaaatgataatggctactaac
agacctgacactttggatccggccttgttgcgtcctggaagacttgaccgaaaaatacat
attgagttgcccaatgagcaggcaaggttagatattttgaaaatccatgctggtcccata
acaaaacatggtgaaattgattatgaagccatagtaaagctttcggatgggtttaatgga
gccgaccttaggaacgtctgcacagaagcggggatgtttgcaatccgagcagatcatgac
tttgttgtccaggaagacttcatgaaagccgttcgaaaagttgcagattctaagaaacta
gagtcgaaactagactacaaacccgtctaa
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