Xiphophorus maculatus (southern platyfish): 102216493
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Entry
102216493 CDS
T02923
Symbol
ogg1
Name
(RefSeq) N-glycosylase/DNA lyase isoform X2
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102216493 (ogg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xma03400
]
102216493 (ogg1)
Enzymes [BR:
xma01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
102216493 (ogg1)
DNA repair and recombination proteins [BR:
xma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
102216493 (ogg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
MycE_N
CbiN
Motif
Other DBs
NCBI-GeneID:
102216493
NCBI-ProteinID:
XP_005801743
Ensembl:
ENSXMAG00000015928
UniProt:
M4ANB3
LinkDB
All DBs
Position
1:complement(19939311..19942459)
Genome browser
AA seq
388 aa
AA seq
DB search
MAKHAVLSSGAKLWRSLPCAKSELRLELTLACGQTFRWRETAEGHWTGVIGGRVWTLTQT
EDTLWYYVYTHQSGAGGENSSEDSLRAESVSASHHSEVEAEMLRDYFQLHVKLGDLYKEW
GAADSHFKKISDIFTGVRMLRQDPIECLFSFICTSNNHISRIQGMVERLCQTLGSPLCQL
DQTSYHDFPTLSALADSGVEERLRDLGFGYRARFLQQSAKQILDTHGPQWLVGLRNVPYL
EARDSLRTLPGVGTKVADCVCLMCLDKCEAVPVDTHVWQIAKRDYKYTSDNGQKTLTEKV
HKDIGDFFRKLWGPYAGWAHSVLFCGDLKKFQNLKEMTGLKQPKNEEERERECKGLKMKR
EFDLHQKKKKPKSERQKKAKMFVKTEEV
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacatgcggtgttgtcttcaggggccaaattgtggcgatctttgccatgcgca
aagtcggagctgcgactggagctcacccttgcttgtggacaaactttccgctggagagaa
actgcagaggggcactggactggagtcataggggggcgtgtttggaccctgactcaaaca
gaagacactctttggtactatgtgtacacacaccagagtggagctggtggagaaaacagc
tcagaagactctctgagggcagagtctgtcagtgcctcgcaccactctgaggtggaagca
gagatgctgagagactacttccagttgcatgtgaagctgggggatctatacaaggagtgg
ggtgcagcagactctcacttcaagaagatttctgacatctttacaggtgtgcggatgttg
cgtcaggaccccatagaatgccttttttccttcatttgcacttccaacaaccacatctcg
cgtattcagggcatggtggagagattgtgtcagactctggggagccctctctgtcagctg
gatcaaacctcctaccatgactttccgacactgtccgcactggcagacagcggtgtagag
gaacgtctcagggatctgggctttggctacagagctcggttccttcagcagagtgctaag
cagatcctggacacacacgggccccagtggcttgttggtttacgaaacgtcccgtatctg
gaggcccgtgattctctccgaaccctccctggagttggcaccaaagtggcagactgtgtt
tgtctgatgtgtctggataagtgtgaggccgttcctgtggacacacatgtttggcagatc
gctaagcgggactataagtatacttctgataacggacaaaagaccctcacagaaaaagtt
cacaaagatataggggattttttcagaaagctgtgggggccatatgcaggttgggcccat
tcggttttattctgtggtgacctcaagaagtttcagaacctcaaagaaatgacaggttta
aagcagccaaaaaacgaagaagagcgtgaacgagagtgcaagggactaaaaatgaagaga
gagtttgatttgcatcaaaaaaagaagaaacccaagtcggaacgtcagaagaaggcaaag
atgttcgtcaagacagaagaggtgtga
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