Xiphophorus maculatus (southern platyfish): 102216529
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Entry
102216529 CDS
T02923
Name
(RefSeq) RNA-binding protein Nova-1-like isoform X2
KO
K14944
RNA-binding protein Nova
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xma03041
]
102216529
Spliceosome [BR:
xma03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102216529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_NusA_2nd
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
102216529
NCBI-ProteinID:
XP_005811448
Ensembl:
ENSXMAG00000013130
UniProt:
A0A3B5R6A3
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All DBs
Position
18:3553963..3638394
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AA seq
496 aa
AA seq
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MMAGGAVQQNGIFSSPHHHSQQPHMESDPPDSRKRPLETPTEASSTKRTNTGEEGEYFLK
VLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVH
DFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATVKAV
MEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKAVEIIIQKIQEDPQSSSCLNISYSN
ITGPVANSNPTGSPYANSTEVMPAAAAAAAATASSLLGQAGLAGVGAFPTTMSSFSGNDL
LAITSALNTLASYGYNTNSLGLGLNPAAASGVLAAVAANANPAAAAAANLLASYASDAST
SAAHPVASLGGLSLGSLAAATGATNGYLSAASPLVASSLLATEKLAEGAKEVVEIAVPEN
LVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSQAATQAAQYLISQR
ITYEQGVRATNPQKVG
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatggccggcggagctgtgcagcaaaacggcattttctcaagtccccaccatcacagt
cagcagccgcacatggagtccgaccccccggattcgcgtaaaagacccctggagaccccg
acggaggccagcagcaccaagcgcacaaacacgggagaggaaggcgagtacttcctgaag
gttttgattcccagctatgctgctggttcaatcatcgggaaaggaggccagaccatcgtt
cagctgcagaaagagactggagccaccatcaaactgtcaaaatccaaagacttctaccct
ggcacgacagagcgggtgtgtctgatccaggggacggtggaggcgttgaatggcgtccat
gacttcatcgctgagaaggtgagggagatgcctcagagcacccagaagacagaaccagtc
agcatcctgcagccgcagaccaccgtcaacccggaccgcgtcaaacaggccaagctgatt
gtccccaacagcacagccggcctcatcatcggcaaaggcggcgctacggtcaaggcggtg
atggagcagtctggggcttgggtccagctatcccagaagcccgagggcatcaacctgcag
gagcgtgtggtcaccatcagtggcgagccggagcagaaccgcaaagccgtggagattatc
atccagaagatccaggaagaccctcagagctcctcctgcctgaacatctcctactccaac
atcaccgggccggtggccaactccaaccccaccggctccccgtacgccaactccaccgag
gtgatgccggcggcggcggccgctgcagccgccaccgcctcctctctgctgggccaggcg
ggcctggcgggagtcggcgcgttcccgaccaccatgtccagcttctcaggcaacgacttg
ctcgccatcacctccgcgctcaacaccctggccagctacggctacaacaccaactctctg
gggctggggctcaatcccgccgccgcttccggggtgctagccgccgtagcggctaacgcc
aacccagcagcggccgccgcggctaatttgttagcgtcgtacgccagcgacgcgtctacc
agcgcggcgcaccctgtcgcgagcctgggaggcctctctctggggtcactggcggccgcc
actggcgccactaatggctacctgagcgcggcgtcgcctctggtggcgtcgtccctcctg
gcgacggagaagctagcagagggagcgaaggaagtggtcgagatcgccgtgccggagaac
ctcgtcggcgccatcttggggaaaggcgggaagacgctagtggagtaccaggagctgacc
ggcgccaggatccagatctcgaagaaaggcgagttcatcccgggaactcggaacaggaag
gtgaccatcacggggtcgcaggccgccacgcaggccgcgcagtacctgatcagtcagcgg
atcacctacgagcagggcgtccgcgccaccaacccacagaaggtgggctaa
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