Xiphophorus maculatus (southern platyfish): 102216574
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Entry
102216574 CDS
T02923
Symbol
dhx36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102216574 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102216574 (dhx36)
03012 Translation factors [BR:
xma03012
]
102216574 (dhx36)
Enzymes [BR:
xma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102216574 (dhx36)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102216574 (dhx36)
Translation factors [BR:
xma03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
102216574 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_22
HA2_N
nSTAND3
ATPase
NPHP3_N
AAA_19
AAA_16
Motif
Other DBs
NCBI-GeneID:
102216574
NCBI-ProteinID:
XP_023207312
Ensembl:
ENSXMAG00000001490
LinkDB
All DBs
Position
18:complement(24953381..24992411)
Genome browser
AA seq
1065 aa
AA seq
DB search
MSYGYGGGGGRRSRKGDRGFRDGSRERLDRGGGGGGGGRGFRGHGSDFDQDRGAGGGQRD
RPPPHLRGRDIGLWYARYGAVRRKQADRRSRAMVHMDEAREEHITKLLNSVQRDPTRDNR
DVPSSVSDAWRTAASSSGHCYFDGDMPEEEKQKLEEEEDGSSKQKKTSRTSQRDSSTAAK
DEPPDNWDADDEDDVEKEKTLSEHKDLEFLFQEVVRDASVDEDLKRDLQSKKTDRNYKEM
LKFREKLPSYGKKEDLVRLINSNRVLVVSGETGCGKTTQVTQFILDDHIRRGRGSTCRVV
CTQPRRISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSILYCTTGIILQWLR
SDPLLSNVSHLVLDEIHERNLQSDVLLIIVKELLNLRDDLKVILMSATLNAEKFSKYFDK
CPMIHIPGLAFPVEEFLLEDIIEMTRYRPQNQDRRPAWKRRFWQGHQSRSEKEEKEEEYK
ESWPCYARTLQGRYSDGTIEAVEMLDTDEKIDLELILALIRHIVLNEGEGAILVFLPGWD
NISSLNDLLTAQQMFRSDRFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIATNIAETSIT
IDDVVYVIDGGKIKETNFDTDNNISTMTAEWVSLANAKQRKGRAGRVQPGKCYHLYNGLR
ASLLEAYQLPEIMRTPLEELCLQIKILKLGSISRFLEKALDPPSEKAVNLAIKSLTDLNA
LDHAENLTALGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEK
MADMRRRTLSRNSKSDHLTIVYAFKGWEEAKQRGSRYERDYCWDNFLSANTLQMLHNMKG
QFAEHLMSAGFVSSRDPKDAKSNINSDNEKLIKAVIVAGLYPKVAMIRPSYSKKRPGVKV
YTQTDGKVCIHPKSVNAEEREFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDITI
QKDEGQETVAVDRWIVFRSPARIAHLVKSLKRELDSLLQDKISNPAPVDWENRQSKDCAV
ITAIIDLITTQERPAGGSKDDGRTWASAPSGRHSYFDDDDDDDDD
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggctacggcggtggaggtggaagaagaagcagaaagggagacagagggttc
agggatgggagcagagagagactggacagaggaggaggaggtggtggcggtgggagaggt
ttcagaggacacggttccgacttcgaccaggaccgaggagcaggaggaggtcagagggac
cgtcctcctccacacctgaggggccgggacattggtttgtggtacgcgcggtatggagca
gtgaggaggaaacaagcggaccgcagatcgcgggccatggtccacatggacgaagccaga
gaggaacacatcaccaagctcctcaactctgttcagagagacccaacaagagacaacagg
gacgtgccgtcctcagtgtctgacgcctggcggacagcagccagcagcagcggccactgt
tactttgacggggatatgcctgaagaagagaagcagaaattggaggaagaggaagatggt
tcttcgaaacagaagaaaacaagccgcacatctcaacgtgactcctctacagcagctaaa
gatgaacctccagacaactgggacgcagatgatgaggatgacgtggagaaagaaaaaaca
ctgagcgaacacaaggacctggagttcttatttcaggaagtagtcagagacgcatcagtg
gatgaggacttgaaaagagatttgcaaagcaaaaagacggatcgaaattacaaagaaatg
ttgaaattcagggaaaaactaccatcatacggaaagaaagaggatctggtgcggctcatc
aactctaaccgcgtcttggtggttagcggggagacggggtgcggaaagaccactcaggtc
acccagttcatcctggacgaccacatcagaagaggccggggctcgacgtgccgcgtggtc
tgcacgcagccccgccgcatcagcgccatctccgtagcagagcgtgtagctgcagaaaga
gcagaaagtgtaggaaatggaaattcctgtggttaccaaatacgcttgcagagccggtta
ccacggagacaaggttcaatactgtactgtacaacaggaattattcttcagtggctccgc
tctgatccgttgttatccaatgtcagtcaccttgtgctggacgagatccacgaaagaaac
cttcagtcagacgttttgctcatcatcgtgaaggaattactcaacctccgagatgatctg
aaggtcatcctgatgagtgccaccctcaacgcagaaaagttctctaaatattttgacaaa
tgtccaatgatccacatccctgggttagcattcccagtggaagaattcctacttgaagac
atcattgagatgaccagatatcgtccgcagaatcaggatcgtcggcctgcgtggaagaga
cgcttttggcagggccaccaatccagatcggagaaggaggagaaggaggaggaatataag
gagagctggccatgttacgcacgaacgctgcagggcagatactctgacggcacaatcgag
gcggtggagatgttagacactgatgagaagattgatctggagctgatcctggcgctgatc
cggcacattgtgctcaacgagggggagggagcaatcttggttttcctgcccggctgggac
aacattagcagtctcaatgacctcctcacggcgcagcaaatgttccgatcagataggttc
gtcatcatccctctgcactccctcatgcccactgttaatcagacgcaggttttcaaaaga
cccccgccaggagtcagaaagattgtgattgcaaccaatatcgcggagaccagcatcacc
atagatgatgtcgtttatgtgatagatggaggaaagattaaggagaccaacttcgacacc
gacaacaacatcagcaccatgacggccgagtgggttagcttggccaacgccaaacagagg
aaaggacgtgctggcagggtgcaaccaggaaagtgctatcatctgtacaatgggcttagg
gccagcctgctggaagcctatcaattacctgaaattatgaggacaccgctggaggagctc
tgcttgcagataaagattctgaagctcggctccattagtcgatttctggagaaggccttg
gacccgccgagcgagaaggcagttaacctcgccatcaagagcctcacagacctgaacgct
ctggaccacgcagagaatctgacagcgctgggtttccacctggcacgtctccccgtggag
ccgcacatcggcaagctaatcctgttcggcgctctgttgggatgcctcgaccccgtactc
accatcgccgcttcgctcagcttcaaagaccctttcttcatacccctgggtaaagagaag
atggcagatatgaggagaaggactctgtccagaaactcaaagagtgaccacctcactatt
gtttacgccttcaagggatgggaggaagccaagcagcgggggtccaggtatgagagggat
tactgctgggacaacttcctgtctgccaacacactccagatgctgcacaacatgaaaggt
cagtttgccgaacatctcatgagtgctggctttgtcagcagccgggatcccaaagacgct
aaatccaatatcaactctgataatgagaagttgatcaaggcagtgattgttgctggactg
taccctaaggtggccatgatccgaccctcttacagcaaaaagagacctggggtaaaggtg
tacacccagaccgacggaaaggtgtgtatccatcccaaatctgtcaatgctgaagagagg
gaattcaactacacatggctcatttaccacctgaagatgagaaccagcagcatcttcctg
tacgactgcaccgaggtgtccccattctcgctgctgttcttcgggggagacatcaccatc
cagaaagacgagggccaggagaccgtcgcggtcgaccgctggatcgtcttcaggtccccg
gcgcgcatcgctcatctcgtaaagagtttgaagagagagctggactcgctgttgcaagac
aaaatcagtaacccggctcctgtggattgggagaaccgccagtccaaggactgcgctgtc
atcacggccatcatagacctcatcactacgcaggaaaggcctgcaggcggcagcaaggac
gacggcaggacgtgggcgtctgcccccagcggaaggcactcttacttcgatgatgacgac
gatgacgacgatgattaa
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integrated database retrieval system
