Xiphophorus maculatus (southern platyfish): 102216604
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Entry
102216604 CDS
T02923
Symbol
rai1
Name
(RefSeq) retinoic acid-induced protein 1 isoform X2
KO
K19749
retinoic acid-induced protein 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102216604 (rai1)
Transcription factors [BR:
xma03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
102216604 (rai1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
102216604
NCBI-ProteinID:
XP_014327899
LinkDB
All DBs
Position
16:complement(13992953..14055548)
Genome browser
AA seq
2192 aa
AA seq
DB search
MQSFRERNSGYHSNQPCYQQEPHELSRLETYRQHPHHPHPQHPHPGPGPHPGPGPGHNRS
GYEAMSNAANVPTGGAAGIGGPKDCYSQQNYSGYPGSTGGSGNGNGSSSASQAKKSFRGS
KVPPPNPSQHLQGPGGYSNHMGPGNYSAQYMSEGHLQQKWEDPAQLAQYEQEMVGRLEAG
ASPAPGSSQYIDSNMLGHSQTPCHQPSTPSYTSPHHQSHPPNPAPSPLMYPQSHLHYPQP
SPSPSPYMEKCSPMPHCYKGYNIPPNSQYSRQLSSHSSLKQGTYRSTQNSYGYQQSTPRG
YEQQTSLQAMTNPQEPHPKYQHYSQPQQNYCLSELPVRSPEQYYQTCSPSSSHSPARSVG
RSPSYSSTPSPLMTNPESFQYGQPPMTPGAASSSSSSSAGMQDQASTNTMLMPPRSHPSP
NISHTASHSYTSTPQAPTMKERFSEKLLSNPSLWSLNALTSQVENISNNVQQLLLSEALV
ANKKGSKRSSGGSNCSTGSGASTKKGEEYKSPPYPDSGGNVGGAPMHEPYSTPQHQPLPM
ELHEGGYSSSSDEPLDRGFYYFGQGRSPAQAHNNTQLSLDTASSCSIASPDDMSTRSGDS
GLHNLTPDPIRCTAGQGGDGMNTPVKSIGDERSPTSITIPSPMKQESDSPSDTQHINQPV
KENFEESAWTEKPAGKEEEAMEKTLDFISNSDSSNPTEKQGKWTDEEKCPNFYSKINTNM
AEKGYCYEDTMYQEVQSKYDSDARDSVEQSPADLSDSSNKDHFSQEMKSGIFKSESPTAS
ESSVKTLPFISRGDLEQDPYSTEKDDSSANTSPTPQTEVLEASSCDKKESRTQENDKDVV
GDREEDEINEDEKEEIEKSSLSQLLSKEVREEAEEEEKESQSLTEEHTDDKDIQMSPSED
LCSRTEIHNLALKTDNDFAGGPGHLNAAAATTATDVSTRESAIGDTAPQPQSAMPVFSAL
NDKAAPPAQARDHIDHSDAKVLEPDSPQLPGKSILPSAPSWADTPPSPQKGDDDIEPGIS
CSSAVTPLAKPEPMVPSAQPRTYGRKHVRGRRRIIHSGVALRRQLSLKKEEEKEDKETNS
SQQKSSMAPSKTVLFSDQTNLAHQDSMVSQTPKMLTDGFQSRMCTRSFNAPDMQTKVEPN
VKRKPGPKPGSKPGSKPSAKPGPKPGAKPGLKSGPKPGPKPGKKTGQKPASRESEVPLKI
DTVVRQKPGPKPGSKSGPKPALRPGLKPGFKPAEVLPPTEAAPIKAPVGRPRGSISKSKL
MDREDPRQQVPEMQSRTRKALKHATLQYNQDGRSPTEEKRSLPEIKVQERENNNMVLRSR
KVSQDKLTKEKERGGEDIQTSTPTENKISDISLKVKEVIVVKKLLTPNPDAMITTNVSLH
SSVPLAKPALSEESKEKTLSILKRTSSPDISTPPVKKKRGPKPKLRNLPSQSVLFEEILP
ARKEKSVRGPRRKRGPPRKASLVSASTKDAPPNSSGSTNSDMPVVPPQCPTKTKVLPPRK
GRGQKYEAMVQKITSPSSKKHFPATQQDSSLSEDFTSKAFSEFVFKEGEAFIQINNTETL
KFTKEEMKEQEEAMTMEDVSQQCGKHELSQEESAKDIVRPLAEEDVTNKNYGRQEKGKVE
TKIEVADNKASSSTETSLEVGTLDERTQQTSKSDATKSVRTKRKRWAMVESTDASVVALE
ADSLIITTPRLAKQRAIKNNHEMHLKQRRKKRKGKANLEETETLDELNTTETPEPVERIE
EKVTTTKSTEPLPTNGDKFTETPQAISVELIQKPRRGRKPSANPTKQRRSQASMEHAPGK
PVKIHKKPGPKPGMKDAIEVIEAVVRAAGCEQDQKEEREKRERENIESEETSIVGPVVTV
TEKQMEFISVKRIRRRPINRNSKLSFCPYVRINNSRDFSSWCAIVNKPEDAVVFQRRRKK
GILRMRNPFTVAKVVPHTAAMQLGPLVNTNLSEMRLMCCLCGKPPNYKDLGDLCGPYYTE
DSIPRKMLTITHTQLFREDDSKTHENDSNSSEEPGTSSKTEDRVNSEKEGNTEATTEEAG
NSRHHHRHYRRLLRPERPCQEGGPRRVTLRQRFRRMKQLQNLCTATSKDQEGNESMFQKL
QMEAVAKEHWAHENCTIWTKGIIMVAGRLYGLKEAANKSVQTSCHKCQISGASLSCCWRG
CSYKYHYICAKEIGCTFHEDDFSIKCPKHEDL
NT seq
6579 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgtgagcgcaacagtggttaccacagcaaccaaccctgctatcagcag
gagccccatgaattatctcgcctggagacctaccggcaacacccacatcatccccatccg
cagcatccacacccaggccctggtccacatccaggccctggccctgggcacaacaggtca
ggctatgaggctatgtctaatgcagcaaacgtgcccacaggtggagcagctggaattgga
ggacccaaggactgttacagccaacaaaactattctgggtacccaggaagtactggaggc
agtggaaatggaaatggtagctcatcagcctcacaggcaaaaaaatcctttagaggaagc
aaagttcccccaccaaaccccagtcaacacctgcagggccctggaggctatagtaatcac
atgggcccaggaaattattctgcccagtacatgagcgagggccatctccagcagaaatgg
gaggaccctgcacagttagcacagtatgaacaggagatggtggggcgactggaggctggt
gcttcccctgcacctggatcctcccagtacatagactcaaacatgttggggcactcccaa
accccatgccaccagccttctaccccaagttatacaagtccacatcaccagtctcaccct
cctaatcctgctccctcacctctcatgtatccccaaagtcacctacactatcctcaaccc
tccccctctccatccccatacatggaaaaatgcagtcccatgccccattgttataaaggc
tacaacatacctccaaattctcagtatagcagacagctaagtagtcatagcagtttgaag
caggggacttacaggtcaacccagaacagctatggataccagcagtcaacacccagaggt
tatgagcagcagacatctttacaggcaatgaccaacccccaagaaccccaccctaaatac
caacactatagccaaccccaacaaaattactgtctgtcagagctccctgtcagatctcca
gaacagtattatcagacttgcagcccctcctcaagtcattcccctgctcgctctgtcgga
cgctcaccctcatacagttccaccccttcaccactgatgactaatccagaatcattccag
tatggccaaccaccaatgacacctggggcagcctcgtcgtcgtcatcctcttcagctggt
atgcaagatcaagccagcacaaacaccatgctaatgcccccacggtcccacccttcaccc
aacatatcccacacagcatcccacagctacacttcaacgccacaagcgcccacaatgaaa
gagcgcttctcagagaagctgttatcaaaccccagcttgtggagcctaaatgctctcacc
tctcaggtggagaatatctccaataacgttcaacagctcctgctttcagaagccctggtt
gcaaacaagaagggcagcaagcgcagcagtggagggagcaactgcagcactggaagtggg
gcctccaccaagaaaggtgaagaatacaaaagccctccatatccagacagtggtggcaat
gtgggtggggcccccatgcatgaaccttactctaccccacagcaccaaccattgcctatg
gaactccatgagggtggctactccagcagtagtgatgaaccattggacagaggtttctat
tactttggccagggtagaagtccagcccaggcccacaacaacacacaactcagcctggac
acagcctcctcttgctccattgcctctccagatgatatgtctactaggtctggggactcg
gggttgcacaaccttacccctgatcctataagatgcacggcagggcaaggaggagatggc
atgaataccccagtgaagagcattggtgatgagagatctccaacaagcattacaatacca
agtcctatgaaacaagaaagtgattccccatcagacacacaacacatcaatcagcctgta
aaagagaactttgaagagtcagcttggactgaaaaacctgctggaaaagaagaggaagca
atggaaaaaactcttgattttataagtaattcagactcaagcaaccctacagagaagcaa
gggaaatggactgatgaggaaaaatgcccaaatttctacagcaaaataaacacgaacatg
gcagaaaaaggctattgttatgaagacacaatgtaccaagaggtccagagcaaatatgac
tcagatgcaagagattccgttgaacagtccccagctgatctctctgattccagtaacaaa
gatcactttagtcaagagatgaagtcagggatattcaaatctgaatctccaactgcatct
gagagctctgtgaaaacactgccattcatttcaagaggagaccttgagcaggatccatat
tccacagagaaagatgacagttcagcaaatacctctccaaccccacaaactgaagtcctg
gaagcttctagctgtgacaagaaggagagcagaactcaggagaatgacaaagacgtagta
ggagatagggaagaggatgagataaatgaagatgagaaagaagaaattgaaaaaagttct
ctttcacagcttttgtctaaagaagttagggaggaagcagaggaggaggagaaagaaagt
cagtcattaactgaagagcacacagatgacaaagacatccaaatgagtccctctgaagat
ctctgcagcagaacagaaatccacaatttagctcttaaaactgacaatgattttgcaggg
ggacccggtcatcttaatgcagcagcagcaacgacagcaacagatgtttcaacaagggag
tcagccattggcgacacagcacctcagccacagtccgctatgccagtcttctctgctctc
aatgataaggcagctcctcctgctcaggctagagatcatattgatcacagcgatgctaag
gttctggagccagactctcctcagctgccagggaagtcaatacttccctctgccccttcc
tgggctgacactccaccatctcctcaaaaaggggatgatgatatagaaccaggcataagt
tgttccagtgctgtgacaccactagctaaaccagagcctatggttccatctgctcagcca
aggacatatgggcgtaagcatgttaggggtagaaggagaatcatacattcaggtgtggca
ttaaggcgacaactgagcttgaagaaggaggaagaaaaggaggacaaagaaacaaattcc
tctcagcaaaaatcgagcatggctccaagcaagactgttttattctcagatcaaactaac
cttgctcatcaggattctatggtgagccagactcctaaaatgctgacagatggttttcaa
tccagaatgtgcactcgctcttttaatgcaccagatatgcaaacaaaagttgaacctaat
gtgaagagaaaaccaggcccaaaacctggatctaagccagggtcaaaacccagtgcaaaa
ccagggcctaagccaggtgctaagcctggtctaaagtcaggtcccaaacctggaccaaaa
cctgggaaaaagacaggacaaaagcctgcatcacgtgaatcagaagtgccactgaaaatt
gatactgttgtaaggcaaaaaccagggccaaaaccaggttcaaaatctggaccaaaacca
gccctaagaccaggtctaaaacctggattcaagcctgctgaggttttgcctcctactgag
gctgctcccatcaaagctccagttggtcgccccaggggctcaatttcaaaatcaaaattg
atggaccgggaagatccaagacaacaagtcccagaaatgcaaagcaggaccaggaaagct
ctaaaacatgcaacactgcaatataaccaagacggaagatctcctacagaggaaaagcga
tctctcccagaaataaaagtacaagaaagggaaaacaacaatatggtcttaagatccaga
aaagtctcacaggataagctaacaaaagaaaaggaaaggggaggggaagatattcaaact
tcaacaccaacagaaaataaaatcagcgatatctctctaaaagttaaagaggtcatagtt
gtaaaaaaactgctaactccaaatcctgatgccatgataacaacaaatgtttccctacac
tcatctgtaccacttgcaaagccagccctctctgaagaatctaaagaaaagacattatca
atactaaagcgcacatctagcccagacatttccacaccacctgtaaaaaagaagagaggt
ccaaagcccaaactaagaaacttaccatctcagtcagtcctgtttgaagagattctacca
gcacgcaaagagaaaagtgtccgaggccccagaagaaagcgaggaccacccaggaaagct
tctcttgtcagtgcctcaacaaaagatgctcctcctaacagcagtggatctaccaacagt
gacatgcctgtggtgcctcctcagtgccccaccaaaacaaaagttctccccccacgcaaa
ggcagaggacagaaatatgaggcaatggtacagaagattacatctcccagctcaaaaaaa
cacttcccagctacgcaacaagacagtagtctaagtgaggattttacgtcgaaggctttt
tctgaatttgtctttaaggaaggtgaggcttttattcaaataaataacacagagacacta
aagtttacaaaggaggaaatgaaagagcaagaagaagcaatgacaatggaagatgtatca
caacaatgtggcaagcatgagttaagtcaagaggaatcagcaaaggatatagtgagacca
ttagcggaagaagatgttacaaataagaattatggaagacaagaaaaaggtaaagtagaa
accaagatagaggttgctgacaataaggcttcgtcttcaacagagacatcattagaagtt
ggaactctagacgagaggacacaacagacttccaagagtgatgccacaaagtctgtccga
acgaagagaaagagatgggccatggtggaaagtacagatgcatcagtggtagctttggaa
gcagacagcctcattattacaacaccaagacttgctaaacagagagctattaagaacaac
catgaaatgcaccttaaacagaggaggaagaagagaaagggcaaagccaatttagaggaa
actgagacactagatgagctcaacacaacagaaacgccagaacctgtggaaagaatagag
gaaaaagtcaccaccacaaagtccacagaacctctaccaactaacggggataaattcaca
gaaaccccccaagccatctctgtagaacttattcaaaaacctcgaagaggccgaaaacca
tccgcaaacccaactaaacaaagaagaagccaagcctcaatggagcatgctcctgggaag
ccagtgaagatccacaaaaaacctgggccaaaacctggaatgaaagatgccattgaggta
attgaggcagttgtaagggcagccggatgtgagcaggaccaaaaagaagaaagagaaaaa
agagaacgagagaatatagaaagtgaagagactagtattgtgggtcctgtggtgaccgtt
acagaaaagcagatggagttcatttctgtgaaaagaatcagaaggagaccaatcaacagg
aattccaaactatctttttgtccttatgtacgtatcaataactctagagacttttcttct
tggtgtgccatagtcaacaagcctgaagacgctgttgtatttcagagacggagaaaaaag
ggcatacttagaatgaggaatcctttcacagttgctaaagtagtgccacatactgctgcc
atgcaactaggaccattggtaaacacaaatctatctgaaatgcgtcttatgtgttgcttg
tgtgggaaaccaccaaactacaaagacctgggtgatttgtgtggaccatactacacagaa
gatagtattccacggaaaatgttgactatcacacatacgcaactcttcagggaagatgac
agcaagacccatgagaatgacagtaacagcagtgaagaaccagggacgtcctcaaagact
gaagatagagtgaactcagaaaaggagggaaatacagaagctaccactgaagaggctgga
aacagcaggcaccatcaccggcactacagacggctactgagaccagaaagaccgtgtcag
gaaggtggtccgagaagagttaccctcagacagagattcaggagaatgaagcagctccag
aatctctgcacggccacttcaaaagaccaagagggcaatgaaagcatgttccaaaagcta
caaatggaggcagtggccaaggagcactgggctcatgaaaactgtaccatctggaccaag
gggataattatggtagctggaaggctgtatggactgaaggaagctgccaacaagtcagtt
caaacgagctgtcacaagtgccagatttcgggagcgtctctcagctgctgttggagaggc
tgctcttataagtaccactacatctgcgccaaagagataggctgcacatttcatgaggat
gatttttccatcaaatgcccaaaacatgaggatctgtaa
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integrated database retrieval system
