Xiphophorus maculatus (southern platyfish): 102216638
Help
Entry
102216638 CDS
T02923
Symbol
ubtf
Name
(RefSeq) nucleolar transcription factor 1
KO
K09273
upstream-binding transcription factor
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102216638 (ubtf)
03021 Transcription machinery [BR:
xma03021
]
102216638 (ubtf)
Transcription factors [BR:
xma03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
102216638 (ubtf)
Transcription machinery [BR:
xma03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
102216638 (ubtf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
102216638
NCBI-ProteinID:
XP_023204223
Ensembl:
ENSXMAG00000008248
UniProt:
A0A3B5R9J7
LinkDB
All DBs
Position
16:5215516..5225652
Genome browser
AA seq
740 aa
AA seq
DB search
MNGDMEVVAQDQVWAQDDLLKLLDSMKVALPQKDLTKYKTSESHLDWQKVAFNSYTAEMC
KQKWQEVSKEIRKFRTLTELIFDAQDYIKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRA
KYAKLHPEMSNLDLTKILSKKYRELPDKKKKKYVEDFLRDKETFVQSMMKFREDHPDLME
SMTKKGSNVPEKPKTPQQLWYNHEKKAFLKSHPDATTKDIKDSLGKQWTQLSDKKRLKWI
SKSLEQQKLYEEAMREYIQQHPELNMSQGDFVKSTLTKAERHLKDKSDGRPDKPPPNGYS
MFCAELMSNMKDVPSTERMVMCSQRWKLLKQNDKDAFQKRCEQRKKEYEIEMNRFLSTLS
EKEQQRVLGEDKIGLKKNSAASSPASKKKNAKTKATTEKPKRPISAMFIFAEEKRSKLQQ
ERPDIPDSELTRLLARMWNELPDKKKEKYKRVEALLKAESEKKEREDRSRLPDPPKTAQE
IWQQSVIGDYVARFKNDRPKAHKAMETVWSTMEKKEKIMWIKKAAEDQKRYERDLCEMRS
PANVVTPLKKMKFEGEPKKPPSNGYQKFSQEMLSNGELNHLPMKERMTEIGSRWQRLPLK
DKDRYKKIAEEKQKQYKVLLEQWLASLSSQERNTYREYNSQKRRAPAKPGGAKAKIKKSD
TEEEEDDDDEEREKASSEADSSSEEDDEDEDDDDNDEDDDDDDDDDDDDDDDEVDDKENK
SDDDSSSDSNSAELSESDSD
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagacatggaggtggtggcccaggaccaagtgtgggcgcaggatgacctccta
aaattgctggactccatgaaagtggctctgcctcagaaggatctgacaaaatacaaaacc
tccgagtcccacctggactggcagaaggtagccttcaactcctacacagcagagatgtgc
aagcagaaatggcaggaagtctcaaaagagatccggaaattcagaactctaacagagctg
atatttgatgcccaggactacatcaagaacccttacaaaggcaagaaattaaagaaacac
ccagattttcccaagaagcctttgactccgtatttccgtttcttcatggaaaagagggcc
aagtatgcaaagttgcatcctgaaatgagcaacttggacctcactaagatcctctccaag
aagtacagggagctccctgacaaaaagaagaaaaagtatgtagaagacttcttgcgtgat
aaggaaacatttgtgcaaagcatgatgaaattcagggaagaccatccagacctcatggag
agcatgactaagaaaggttcaaatgtcccagaaaagcccaagacgccccaacagctgtgg
tacaaccatgaaaaaaaggcgttcctcaagtcgcaccctgatgcgaccaccaaagacatc
aaggacagtcttggtaagcagtggacgcagctgtctgacaaaaagaggctcaaatggatt
agcaagtccctggagcagcaaaagttgtacgaggaagcgatgcgggaatacatccagcag
cacccggagctgaacatgagccagggagactttgtgaagtccaccctgaccaaggcggag
cggcacctcaaagacaagtccgatggccggcccgacaaaccacctccaaacggttactcg
atgttctgcgccgagctgatgtccaacatgaaggacgttccgagcacggagcgcatggtt
atgtgcagccagcggtggaagctcctgaagcagaacgataaggatgcgttccagaaacgc
tgcgaacagaggaagaaggagtatgaaatagagatgaacagattcctcagtaccttgtca
gagaaggagcagcagcgagttctgggggaggataagattggtcttaaaaagaacagtgca
gccagcagccctgcctctaaaaagaaaaatgctaaaacgaaggcaactacagagaaaccc
aagaggcccatctctgccatgttcatatttgctgaggagaagcgatccaagctgcagcag
gagcgacccgacattcctgacagcgagctcaccagactcctggcccgcatgtggaacgag
ctgcctgataagaagaaggagaagtataaacgagtggaggcacttctgaaagccgagtct
gagaagaaagagagggaggacagaagtcgcctgccggatccgcccaaaacggctcaggaa
atctggcagcagagtgtcataggggactacgttgccagatttaagaatgatcgaccaaag
gcacataaagccatggaaacggtgtggagcaccatggagaaaaaggagaagatcatgtgg
atcaaaaaagctgcagaagaccagaaaagatatgaaagagatctgtgtgagatgcgatct
cctgctaacgtcgtcacacctttgaagaagatgaagttcgaaggagaacccaaaaaaccg
ccgtcaaacggataccaaaagttctcccaggagatgctgtctaacggcgagctgaaccac
ctcccgatgaaggagcgaatgaccgagatcggcagccggtggcaaaggctgccgctgaag
gacaaggaccgctacaagaagatcgccgaggagaagcagaagcagtacaaagtcctcctg
gaacagtggctcgctagcttgtcttcacaagagcgaaatacgtacagagaatacaattcc
caaaaaagaagagctccagcaaaaccaggaggcgccaaagcaaagattaagaaatctgac
actgaggaagaggaggatgacgatgatgaagagcgggagaaggcttcgtctgaagcagac
tcctccagtgaggaggatgatgaagatgaagacgacgatgataacgatgaagatgacgat
gatgatgatgacgacgatgacgatgatgatgatgatgaggtggatgacaaagaaaacaaa
tcggacgatgacagcagcagcgactctaactccgccgagttgtcagagtcggattcggac
tga
DBGET
integrated database retrieval system
