Xiphophorus maculatus (southern platyfish): 102216676
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Entry
102216676 CDS
T02923
Name
(RefSeq) transcription factor Sox-19b-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102216676
Transcription factors [BR:
xma03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102216676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
102216676
NCBI-ProteinID:
XP_005807979
Ensembl:
ENSXMAG00000008210
UniProt:
M4A188
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All DBs
Position
14:complement(3654792..3659733)
Genome browser
AA seq
304 aa
AA seq
DB search
MYSLMEHELKPNGQPQTHQTTGMSPITGNLTGSMGTNGNSLPKTACPPGGDPMDKVKRPM
NAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHMKEY
PDYKYKPRRKTKPLLKKDAQVGKYPLSAGNLLTAAAQNQGGSPRMEGYGWAPTGGYTGMQ
NEALSYTQQLHRYDLSALQYPPAMTAAQTYMSGANSYSPMSYSSSPQQLSPVNMPMVKAE
PVAHSPSTGTPNHHRGALQGDLRDMISMYIPGPGGDSSDPATAQRGYTSVQQHYLSGTVP
LTHI
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcttgatggaacacgagctgaaaccaaacggccagcctcagactcaccagacc
accgggatgtcaccgatcaccggcaacctcaccgggagtatggggaccaatgggaactct
ctcccgaaaacggcttgtccacctggaggcgaccccatggataaagtcaagaggcccatg
aacgcttttatggtgtggtcaagaggacagaggcggaagatggcccaggagaaccccaag
atgcacaactccgagatcagtaagcgactgggagccgagtggaaacttctgaccgatgct
gagaagcggccgttcatcgacgaggccaagagactccgggccgtccacatgaaggagtac
cccgactacaaatacaaaccccgccgcaaaaccaagccgctgctgaagaaggacgcgcag
gtgggcaaatatccgctgtcagcagggaacctactgacggcagcggcccagaaccaaggc
ggcagtccccggatggagggctacggctgggctcccaccgggggctacaccggcatgcag
aacgaggcgctcagctacacgcagcagctgcaccggtacgatctgtccgccctccagtac
ccgcccgcgatgacggcggcgcagacgtacatgagcggagccaactcctacagtcccatg
tcatacagcagcagtccgcagcagctgagcccggtgaacatgcccatggtgaaggcagaa
ccggtggcccattcgccctcaacaggaacgccgaaccaccaccgaggggctttgcagggg
gatctcagggacatgatcagcatgtacattcctggacctggaggggattcctccgatcct
gcgactgcacagaggggctacaccagtgtccagcagcactatctcagtggaacggtgcca
cttacgcacatttag
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integrated database retrieval system
