Xiphophorus maculatus (southern platyfish): 102216698
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Entry
102216698 CDS
T02923
Name
(RefSeq) cadherin-4-like isoform X2
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102216698
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xma04515
]
102216698
Cell adhesion molecules [BR:
xma04515
]
Cadherins
Major cadherins
102216698
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
DUF2254
Cytomega_TRL10
DUF5527
Motif
Other DBs
NCBI-GeneID:
102216698
NCBI-ProteinID:
XP_005812006
Ensembl:
ENSXMAG00000015503
LinkDB
All DBs
Position
1:complement(21484294..21748469)
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AA seq
864 aa
AA seq
DB search
MGNEAVVFQSTDPVFNVQTDGSIFAKGQGASLDETVQFKVTARGPHTNVWETVVQLTLID
LSSSGQNENEVTEEAGNISEQNKKKDASQAPTPVIMFPGSRVNSTRGLRRQKRDWVIPPI
NVAENSRGPFPQMLVSIRSDQDQDIPIRYSITGVGADQPPNEVFSIDPVLGKMFVTKPLD
REHRSSYHLRAHAVDINGNQVENPIDLYIFVIDMNDNRPEFKNQVYNGSVDEGSKPGTYV
MHLSAFDADDNTTANGMVRYRILSQTPHSPIPNMFTITSETGDITTVAPGLDREKVSQYT
IIVQATDMEGNLNFGLSNTATAIITVTDINDNPPMLTSRTFSGEVPENTVDVAVANLTVI
DADQPHSPNWNAVYRIISGDPTGHFTIRTDPISNDGMVTVVKPVDFEMNRSFMLTVVVSN
QAHLASGIQSSLQSTTGVTISVKDVNEPPYFPTNPKQIRFEEGVPTGTSLTTFSASDPDR
LQMQQIIRYSKLNDPANWLSINRTSGQIVTTGMLDRESVYVKNNIYEATFLATDNGSPEA
SGTGTLQIYLIDINDNPPALIPRESQICERMNKNVNGVNITAADADTDPNAGPFVFELPN
FPSSIRRNWTIARISGDYARLALRYQIYLEPGMYEVPIIVSDSGNPPLSNRSVIKVKVCP
CDENGDCTTLGAVAAAGLGTGAIIFILICIIILLCMVLLFVVWIKRREKERQTKQLLIDP
EDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDSLEHIISKPPGVRRVDERPIIPESQYPI
RPVVPHPGDIGDFIHEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSTGDQD
YDYLNDWGPRFKKLADMYGGGDDD
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggggaatgaggccgtggttttccagagcaccgacccggtcttcaacgtccagacagat
ggatccatctttgccaagggacagggagccagcttggatgagacagttcagtttaaagtg
acagcgcgtggccctcacacaaatgtctgggagactgtggttcaactgaccctgattgac
ctgtcgtcatcagggcaaaatgaaaatgaggtcacagaggaagcagggaacatcagtgag
caaaacaagaagaaggacgcgtcgcaggcaccaactcctgtcatcatgttcccagggtcc
cgcgtcaacagcaccaggggtctccgaaggcagaagagagactgggtgatcccaccaatc
aacgtggcagaaaattctcgtggaccattccctcagatgctcgtcagtattcgttccgac
caagaccaggacattccaatccgatacagcattactggggtgggagcagatcaaccaccc
aatgaggtgttcagcatcgaccctgtgctcggaaagatgtttgtcaccaaacctctggat
cgagaacatcgatcttcttatcatctgcgggcccatgcagtggacataaatgggaaccag
gtcgagaatccgattgatctgtacatcttcgttatcgacatgaatgacaacaggccagag
ttcaaaaaccaggtctacaatggttctgtggatgaaggttctaaaccaggtacttatgta
atgcatctatctgcatttgatgccgatgacaacaccacagctaatggaatggtgcgctat
cggatcctgtcccagacaccgcacagccccatccctaacatgttcaccatcaccagtgag
acaggggacattacgacagtggcgcctggactcgacagagagaaagtgtcccagtacacc
atcattgtgcaagccacagacatggagggaaacctcaactttggcctttccaacacagcc
actgccatcatcactgtcacggacatcaacgataaccctcccatgctgacctcaagaact
ttttctggcgaggtcccagagaacacagtggatgttgcggtggctaatctgactgtaata
gatgctgaccagcctcattctcctaactggaacgccgtttacaggatcatcagtggggac
ccaactgggcactttaccatccgcactgatcccatttccaacgacggcatggtcaccgtg
gtgaagccagtcgatttcgagatgaaccggtccttcatgctgacagtggtcgtgtcaaac
caggcccacctggccagcggcatccagtcttcactccagtcgactactggagtcaccata
tctgtgaaggacgtcaacgagcccccttacttccccaccaaccccaaacagatccgattc
gaggaaggcgttcctactggcaccagcctgaccactttctcagcctcagatcctgacaga
ctccagatgcaacagataatcaggtattcaaagctgaacgatcccgcaaactggctgtct
attaacagaaccagcggtcagattgtaacaactggaatgctcgaccgggagtccgtctac
gtaaaaaacaacatatacgaagctacttttctggctacagacaatggctctcctgaagcc
agtggcacaggcacattgcagatctatttgatagatattaatgacaaccccccagcgctc
ataccaagggagtctcagatctgcgaaaggatgaacaaaaacgtcaatggtgtcaacatc
actgccgccgatgctgacacggatcccaatgctggaccctttgttttcgagctgcccaac
ttccccagcagcatccgacgcaactggaccattgcacggatcagtggtgattatgcccgt
cttgctcttcggtaccagatctacttagaaccaggaatgtacgaggtccctatcattgtg
tcagactctggcaaccctccgttgtccaacaggtctgtcatcaaagtgaaggtttgtccg
tgcgatgaaaatggagactgtaccacacttggtgctgtcgcggccgctggcctggggact
ggagccatcatcttcatcctaatttgcatcatcatactgctgtgcatggtgctgttgttt
gtggtatggatcaagcgcagggagaaagagaggcagacgaagcagttgctgattgaccct
gaagatgacgtccgagacaacatcctcaaatacgacgaggagggcggaggagaagaggat
caagactacgacttgagccagctgcagcagcccgactctttagaacacatcatcagcaag
ccgcctggcgtacgcagagttgatgagaggcccatcatcccagagtctcagtaccccatc
agaccagttgtgccccatcctggagacattggagactttatccatgagggtctgcgggct
gcagacaacgaccccacagcccctccgtatgattccctgctcgtttttgactatgagggc
agcggctccactgccggctcagtcagctccctcaactcttccagcacaggagatcaggac
tatgactacctcaatgactggggaccccgttttaagaagttggctgacatgtatgggggt
ggggatgacgattaa
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