Xiphophorus maculatus (southern platyfish): 102216809
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Entry
102216809 CDS
T02923
Name
(RefSeq) neurexin-1a-like isoform X1
KO
K07377
neurexin
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102216809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102216809
Membrane trafficking [BR:
xma04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
102216809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Prokineticin
Motif
Other DBs
NCBI-GeneID:
102216809
NCBI-ProteinID:
XP_014331088
Ensembl:
ENSXMAG00000016119
UniProt:
A0A3B5QF08
LinkDB
All DBs
Position
10:complement(10487643..10572359)
Genome browser
AA seq
1487 aa
AA seq
DB search
MSVMAVCVWAAAPLLFLGLCLCSVGGQAQGEVLEFGGVSSQWGRFPVWNACCESVLSFSL
RTQSQEGLLLYLDDEGFCDFLELLLLHGHLRLRFSIFCAGPAELQSGVAVSDGRWHAVRV
KRDWRNTSLEVDGRLEGWAEVKSQRRDMTVLSHTYMGGLPADLYSSPLHLTSVSVREHHP
AFRGWITAVSINGLLVALNSSEGVTVTTVCGPDHQCQNGGVCSVVNDQAVCDCSDTGYQG
NDCSEEHSHTPGLANLMVGDQGKPRAREEYVATFKGSEYFCYDLSPNPIQSSSDEITLSF
KTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKV
TRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSN
NFMGCLKEVVYKNNDVRLELSRLAKEGDPKMKVSGVVSFKCESVATLDPVTFDTPESFVA
LNKWMAKKAGSISFDFRTTEPNGLMLFSHGKSRQQQRKDPRTPPTVKVDFFAIEMLDGHL
YLLLDMGSGTTKTKAIDKKVNDGEWYHVDFQRDGRSGTISVNSVRTAYTAPGDSEILDLD
DTLYLGGLPEDRGGLIFPTEVWTALLNYGYVGCIRDLFVDGQSKDIRRLAEAQRAVGVKP
SCSRELPKQCLSNPCQHNGNCREGWNRYVCDCSGTGYLGRSCERDATILSYDGSKFMKVQ
LPVAMHTEAEDVSLRFRSQRAYGILMATTSRNSADTLRLELDGGRVRLTVNLDCIRINCT
ASKGPETIFAGSGLNDNEWHTVRVVRRGKSLKLTVDDLQTVEGQMAGDHTQLEFHNVETG
IVTEKRFMPIVPSNFIGHLQGLTLNGMPYIDLCKNGDIDYCELNAVIGYKSIVADPITFR
SRSSFVTLPTLQAYYSMHLFMQFKTTSPDGLILFNRGDGNDFIVIELVKGYLHYISDLGN
GAHLIKGNSNSPLNDNHWHNVHISRDTNNLHTVKIDTKVTTQTTMGAKNLDLKGDLYIGG
VTKEMYRELPKLVHSREGFQGCLATLDLNGRLPDLLADALTTVGQVERGCEGPSTTCQED
SCSNQGVCLQQWEGFTCDCSMTSYAGPLCNDAGTTYIFGRDGGVVIYTWPPNERPSTRAD
RLALGFSTQQKHAVLLRVDSASGLGDYLQLQIDKGNIRVVFNVGTDDINIEESSKFVNDG
KYHVVRFTRSGGNATLQLDDLPVIERYPSGNNDNERLAIARQRIPYRLGRVVDDWLLDKG
RQLTIFNSQTTVRVGGGEQGSAMFQGQLSGLYYNGLRILNMAAEGHPHIRVEGSARLVGD
MPSSSITPQSSAAAGANRSDSAPSISDITTTTATNKKQVVTQTVDDLLVASAECPSDDED
IDPCDSSARPPPPDVKVFPGPSEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRD
EGSYHVDESRNYISNSATQPNGSAKDKPLGIAKISKNKKNKDKEYYV
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtaatggcggtttgcgtttgggcagcagcccccctgctctttctggggctgtgc
ctgtgcagcgtagggggccaggctcaaggggaggtcctggagtttgggggcgtatccagc
cagtgggggcggtttccggtgtggaacgcttgttgcgagagcgtgctgagtttcagcctg
cggactcagagccaggagggcctgctgctctacctggatgacgagggcttctgcgacttc
ctggagttgctgcttctccacgggcacctgcgcctacgcttctccatcttttgtgctggg
ccagctgagctgcagtcaggcgtggcggtgagtgatgggcggtggcatgcggtgcgtgtc
aagcgggactggaggaacacctcgttggaggtggatgggcgactggagggatgggcagaa
gtgaagagtcagagaagagacatgacagtactcagtcacacatacatgggcgggttgcca
gcagatctctactcctcgccactacacctcacctcagtctcagtgcgggagcaccaccct
gcctttcgtggctggatcacagcagtgagcatcaacggcttgctggtcgcgctgaacagc
tcagagggcgtcacggtaacaactgtctgcgggccggaccaccagtgccagaacggaggg
gtgtgcagcgtggtcaacgaccaggccgtctgcgactgctccgacaccggctaccaaggc
aatgactgcagcgaagagcacagccacactccaggtctggcaaacctgatggttggcgac
caaggaaaacccagagctcgtgaggagtatgttgccacctttaagggctctgagtacttc
tgctacgacttgtcgcccaaccccatccagtccagcagcgacgaaatcacgctgtccttc
aagacgttgcagcgcaacggcctgatgctgcacacgggcaagtcagccgactacgtgaac
ctggcactaaagaatggtgccgtgtcccttgtcattaatctcggctctggggccttcgaa
gccctggtggagcccgtcaacggcaagttcaacgacaacgcctggcacgacgtgaaagtc
acccgcaacctgagacagcactcaggcattggacacgctatggtgacgatctccgtggac
gggatcctgaccacgacgggatacacgcaggaggactacaccatgctgggctctgacgac
ttcttctacgtgggaggaagtcccagcacagcggaccttcctggttctcctgtcagcaac
aacttcatgggttgtctcaaagaggtggtatacaagaacaacgatgtacggttggagctt
tcaagactggccaaagagggcgacccaaagatgaaggtcagtggtgtggtgtcctttaag
tgcgagagcgtggcaacgctggatccagtgacgtttgacaccccagagtcattcgtggct
ttgaacaagtggatggcgaagaaggcgggatccatttcgtttgacttcaggaccacagag
ccgaacgggctgatgcttttcagccatggcaaatccagacaacagcagcgcaaagacccc
cgcacccctcctaccgtcaaggtggatttttttgccattgaaatgctggatggtcacctg
tacctgctgctggacatgggatctgggaccacaaagaccaaggccatcgacaaaaaggtc
aacgacggggaatggtatcacgttgacttccagagagatggacgctcaggaaccatctcg
gtgaacagcgtgagaacggcgtacacggctccgggggacagtgagatcctggacctggat
gacacgctgtacctcggaggacttcctgaggatcgcggcggactcattttccccacagag
gtgtggacagccctgctgaactacggctacgtaggctgcatcagagacctgtttgtggac
gggcagagtaaagacatcaggcggcttgctgaggcccagcgggcggtcggagtgaagcct
tcgtgctccagagagctgcccaaacaatgcttgtccaacccctgccagcacaacggcaac
tgcagggagggctggaaccgctacgtctgcgactgctccggtactggatacctggggcgc
tcctgtgagcgagatgcgaccatcctctcctacgacggcagtaagtttatgaaggtacag
ctgcctgtggcgatgcacactgaggcggaggacgtctcgctacgctttcgctcccagcgg
gcctacggcattctcatggcaaccacatcccggaactcggcagacacccttcgtctggag
ctggacggcggccgagtccgactcactgtaaacctagactgtatcaggataaactgtaca
gccagtaaaggcccagagacaatctttgctgggtcgggcctcaatgataatgaatggcac
acggtgagggtagtccgacgcggcaagagcctcaaactcaccgtggacgacctgcagact
gtcgaaggtcaaatggcgggtgaccacacccagctcgagttccacaacgtggagacgggc
atcgtgacggagaagcgcttcatgcccatcgtgccctcaaacttcatcggccacctgcag
ggcctgacgctgaacggcatgccctacatcgacctgtgcaagaacggcgacattgactac
tgtgagctcaatgccgtcatcggctacaagagcatcgtggctgaccccatcaccttccgc
tcccgctccagcttcgtcacgctgcccacgctgcaggcctactactccatgcacctcttc
atgcagttcaagacaacgtccccagacggccttattctcttcaacaggggagacggcaat
gacttcatagtcattgagttggttaaaggctaccttcattacatctctgacctgggaaac
ggagcgcacttgatcaagggcaactccaacagtccgcttaatgacaaccactggcacaat
gtgcacatttcccgggacacgaacaatctgcacacagtcaagattgacaccaaagttacc
actcagaccacaatgggagccaagaaccttgacctaaaaggtgatctgtacattggtggt
gttactaaagagatgtaccgtgagctgccgaagttggttcactcccgggagggatttcaa
ggttgcctggcaacactagatctaaatggccgccttccggacctccttgctgacgccttg
acgaccgtggggcaagtggagagaggttgtgaaggtcccagcacaacatgtcaagaagac
tcctgctcaaatcaaggagtctgtttgcagcagtgggagggcttcacctgtgactgcagc
atgacatcatacgccgggccgctctgcaatgatgctgggaccacctatatctttggccgg
gacggcggcgtggtgatttacacgtggccgcctaatgagcgtcccagcaccagggcggac
cggctggctcttggcttcagcacccagcagaaacacgccgttctgctccgagtggacagt
gcatctggccttggagactacctccagctgcagatagacaagggcaacattagggtggtg
ttcaatgtcggcacagatgacatcaatattgaggagagctccaagttcgtcaatgacggg
aagtaccacgtagtccggttcaccagaagcggtggcaacgcgacgctgcagctggacgac
ctgccggtcatagagcggtacccctcaggcaacaatgataacgagcgcctggccatcgcc
agacagcgaatcccctatcggctcggtcgagtagttgacgattggctactcgacaaaggt
cggcagctgaccatcttcaacagccagacgacagttcgtgtcggcggaggcgagcaaggt
tctgccatgttccagggccagctgtccggcctttactacaacggcctccgcatcctcaac
atggccgccgagggccacccgcacatcagagtggagggcagcgcgcggctggtcggcgac
atgccatcctcctccatcacaccccagtccagtgccgcagccggcgccaaccggtcagac
tccgccccctcgatcagtgacatcacaaccaccacggcgacgaataagaagcaagtggtg
acacagacggtagacgacctgctggtcgcgtccgccgagtgtccgagcgacgatgaagac
attgacccctgtgacagctcagcccgccctccgccgccagatgtgaaggtgtttcctggt
ccgtccgaggtggtgcgggagagcagcagcaccaccggcatggtggtgggcatcgtggcg
gccgccgccctctgcatcctcatcctcctctacgccatgtacaagtaccgcaaccgcgac
gaaggctcctatcatgtggacgagagccgcaactacatcagcaactcggccacgcagccc
aacggcagcgccaaggacaaaccgctgggcatcgctaagatctctaagaacaagaagaac
aaagacaaggagtattatgtctga
DBGET
integrated database retrieval system
