Xiphophorus maculatus (southern platyfish): 102216824
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Entry
102216824 CDS
T02923
Symbol
arfgef1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102216824 (arfgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xma04131
]
102216824 (arfgef1)
Membrane trafficking [BR:
xma04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
102216824 (arfgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
102216824
NCBI-ProteinID:
XP_023182012
Ensembl:
ENSXMAG00000009585
LinkDB
All DBs
Position
21:10471225..10527291
Genome browser
AA seq
1947 aa
AA seq
DB search
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKEESEKLSPPSGDGKS
GSSTLPPIKSKTNFIEADKYFLPFELACQSKCPRIVITSLDCLQKLIAYGHLTGSAPDST
APGKKLIDRIIETICACFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALTNHKLSWSLASRKRDRQLQEAKQLER
ERHRQQSPVAQHTEPESPQLQTHVHPPSKTPTQEANGPVSPATPSIATPSTPSTPSTPAP
ESSSSRSASGEREVQGEQPAPDENPDPENGSEFCVAENEQTEADQATAANAASKQHKGAG
EEEDEEAPNYEEKAQEIVQSILQEVVNTVAGGHCLDPANLCSDTKESTGEGEPEESPPAE
AATEGTQSSMEDEGTVGSDSEHVHANGIPGTPISASFTPSLPDDRLSVSSTDTQESGATA
GQPPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKVLSLQLLLSILQNA
GPIFKTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSHFKTHLKMQIEVFF
KEIFLYILETSTSSYDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLS
KIAQGRGGHELGTTPQQELTLRKKGLECLVSILKCMVEWSKDQYVNPNSQTSLGQEKPSE
QDSSETKATESINRYGSINSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGID
LFNKKPKRGIQYLQEQGMLGTTPEDLAQFLHQEERLDSTQVGEFLGDNDRFNKEVMYAYV
DQMDFQGKDFVSALRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVL
AYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYDEIAGKKIAMKET
KELTMKSNKQSVASEKQRRLLYNVEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMF
KLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLL
TASSGIAEMKQKNIDTIKTLITVAHTDGNYLGNSWHEIMKCISQLELAQLIGTGVKARYI
SGTVRGKEGFITSTKEQNNDEYLGLVGGTVDRKQIASIQESIGETSSQSVVVAVDRIFTG
STRLDGNAIVDFVRWLCAVSMDELASPTHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVI
GDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKKNRSPT
IRDMVVRCIAQMVNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTNVFEK
HFAATIDSFQDAVKCLSEFACNASFPDTSMEAIRLIRHCAKYVSERPQAFKDYTSDDMNV
APEDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTFEKHWWQDLFRIV
FRIFDNMKLPEQQTEKAEWMTTTCNHALYAICDVFTQYFESLNGLLLDDILAQLYWCVQQ
DNEQLARSGTNCLENVVILNGEKFSAETWDKTCNCMLDIFKTTIPHSLLTWRPAGAEGEH
FATHSLTDKQLDSISQKSVDIQSRSDDQHSISSGDRAAMESRRQSQHSSASGVFEDGSRS
RTSTKIQEQRLFSALLIKCVVQLELIQTIDNIVFFPATSKKEDAENFAAAQRDAGCAADV
QVETQDQGMFRYLTSEQLFKLLDCLLESHRFAKAFNSNNEQRTLLWKAGFKGKSKPNLLK
QETSSLACGLRILFRMYTDESRQGAWEEVQRRLLNVCSEAVAYFLALTSESHREAWTNLL
LLFLTKVLKISDERFKAHASRYYPLLCEIMQFDLIPELRAVLRKFYLRIGLVFNIAQLPE
PEPDPEPRRAEPETDMEVGEEAGEEAQ
NT seq
5844 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagggcaaaaagacgaaaaacatgttcctcacacgagctttggagaagatcctg
gccgacaaggaggtgaagaaggctcatcactcacagctgcgtaaagcctgcgaggtggca
ctggaggaaattaaggaagaatcagagaaattaagtccaccaagtggagacggcaaatct
ggctccagcacattaccgcccatcaaatccaagacaaatttcatcgaggctgacaagtac
ttcttgccgttcgagctagcatgtcaatccaaatgtcctcgcatcgtcatcacctcactc
gactgtttacagaagctgatagcgtacggccacctgacgggcagtgctccggacagcaca
gcgccaggaaagaagctcatcgacaggatcatcgagaccatctgcgcgtgttttcaggga
cctcagactgacgagggcgtgcagctacagattattaaggctctgctgacagcagtcacc
tcccagcacatagaaatccacgaaggcaccgtgctgcaagctgtccgcacctgttacaac
atctacctggcgagcaagaacctcatcaaccagaccacggcgaaggccacgctcacgcag
atgctcaacgtcatcttcgcacgcatggagaaccaagcacttacaaatcacaagctatct
tggtctctggcctccagaaagcgtgaccgccagctgcaggaagccaaacagctggagaga
gagcggcaccgacagcaatccccagtagcccagcacaccgagccagaatccccccagctc
cagactcacgttcacccacccagcaagacccccacccaggaggccaatggccccgtcagc
cctgcgacccccagcatcgccaccccctccacgccgtccaccccatccacgccggccccg
gagtccagcagcagcaggtctgcgtctggggagcgggaggtgcagggggagcagcctgcc
cccgacgagaacccggatcctgaaaatggttctgagttttgcgtggctgagaacgagcag
acagaggcagaccaagccaccgcagcaaatgcagcatccaaacaacataaaggagcaggt
gaagaagaggatgaggaagcgcctaactacgaggagaaagcccaggaaattgtccagagt
attctgcaggaagtggtcaacactgtggctggaggccactgcctggacccagcgaacctc
tgctccgacaccaaggagtcaaccggcgagggcgagccagaggagtccccgccggccgag
gcagcgactgaaggcacccagagctcgatggaggatgagggaacagttgggagcgacagt
gagcacgtccatgcaaacggcattcccggcacgcctatttctgctagctttacgccctcg
ttgcctgacgacagattatccgtctcctccaccgacactcaggaatcgggagcaacagct
ggccagccgccaggtgctaagttctcccacatcctccagaaggacgcttttcttgtcttt
cgctctctctgcaagctgtcgatgaaaccactatcagacggaccgcctgatccaaagtcc
cacgagctgcgatcaaaggtgttgtctctgcagcttctgctgtccatcctgcagaatgcc
gggcccatcttcaagaccaacgagatgttcataaacgccatcaagcagtatttgtgcgtg
gcgctgtccaagaacggtgtctcctctgtgcctgaagtctttgagctctctctctccatc
ttccttaccctgctctcccactttaagacccacctcaagatgcaaatcgaggtgttcttc
aaagagattttcctgtacatacttgagacgtccacaagctcttatgaccacaagtggatg
gtcatccaaacgctcaccagaatatgtgcagatgcccaaagtgtggtggacatctatgtg
aactacgactgtgacttgaatgctgctaatatatttgagcgcttggtcaacgacctctca
aaaatagcccagggccgcggaggccacgagctcggcacaacaccccaacaggagctgact
ctaagaaagaaaggccttgaatgtctagtgtccatcctaaaatgtatggtagaatggagc
aaagaccagtacgtcaaccccaattcccagaccagcctaggccaggagaaaccttcagag
caggacagctcagagaccaaggccacagagagcataaaccgctacggcagcatcaactcc
ctggactccacggcctcgtctggcatcggtagctacagcacacaaatgtccggcaccgac
aaccccgaacagtttgaagttctcaagcagcagaaggagatcatcgaacaggggattgac
ctgttcaacaagaaaccaaagagaggaatccagtaccttcaagagcaaggcatgctgggt
acaaccccagaggatcttgcacagttcttgcaccaggaggagaggcttgactcgactcag
gtgggtgaattcctcggcgataacgaccgtttcaataaagaggtcatgtacgcctacgtg
gatcaaatggacttccagggcaaagactttgtttccgctctaaggatgttcctggagggc
ttccggctccccggcgaggcccagaagatcgaccggcttatggagaaatttgcagcaaga
tacctggaatgcaatcagggacaaacactctttgccagtgcagacacagcatatgttctc
gcctactcaatcatcatgttgacaacagacctccacagcccgcaggtgaagaataaaatg
acaaaagaacagtacatcaagatgaaccgtggcatcaatgacagcaaagacctgcctgag
gagtatctctcagccatatacgatgagatcgcagggaagaagattgccatgaaggaaaca
aaagagctcaccatgaagtccaacaagcaaagtgtggccagcgagaagcagaggcgtctg
ctctacaacgtggaaatggagcagatggccaagacggccaaagctctgatggaggccgtc
agccacgtccaggcccccttcaccagcgccacgcatctggagcacgtcaggcccatgttc
aagctggcgtggacgcccttcctggctgccttcagcgtcggcctgcaggactgtgacgac
actgaagtggcctcgctgtgtctcgaaggaatacgctgcgccatcaggatagcatgcatc
ttttccatacagctggagagggatgcttacgttcaggctctggccaggttcaccctgctg
acggccagctccggcatcgcagaaatgaagcagaagaacatcgacaccatcaagaccctg
atcactgtggcacacacggatggcaactacctgggcaactcctggcacgagatcatgaag
tgcatcagtcagctggagctggctcagctgattggtacgggggtgaaggctcgctacatc
tcagggacggtgcgggggaaagagggtttcatcaccagcaccaaggagcagaacaacgac
gagtacctgggtttagttgggggaacagtagaccgtaagcagattgccagcattcaggag
tccattggtgagacgagctctcagagcgtggtggtggctgtggacaggatcttcacaggc
tccaccagattggatggtaacgcaatagtggattttgtgcgctggctgtgtgctgtgtcc
atggatgagctggcctcgcccacacatccacgcatgttcagcctgcaaaagatcgtggag
atctcctactacaacatgggccgcatcaggttgcagtggtccaggatctgggaggtgatc
ggagaccacttcaataaggttggctgtaatcccaatgaagatgtagcaatttttgccgtc
gattctctcaggcagctgtccatgaagttcctggagaaaggggagctggctaacttccgc
ttccagaaggactttctgaggccgttcgagcacatcatgaagaagaacaggtctcccacc
atcagagacatggtggtgcgctgcatagctcagatggtgaactcccaggctgccaacatc
cgttcaggctggaagaacatcttctcagtgtttcacctggcggcgtctgaccaggacgag
agcatcgtggagctggccttccagaccaccggccacatcgtcacgaatgtattcgagaag
cactttgcagccaccatcgactccttccaggacgccgtcaagtgtctctcggagttcgcc
tgcaacgcctctttcccagacaccagcatggaagcaatccgcctcatccgccactgcgcc
aaatacgtctcagagagaccccaggccttcaaagactacaccagtgacgacatgaatgta
gcccccgaggaccgggtgtgggtgcgagggtggttccccatcctgtttgagctctcctgc
atcatcaacaggtgcaaactggatgtcagaaccaggggcctcacggtgatgtttgaagtg
atgaagacctatgggcataccttcgagaaacactggtggcaggacctgttcagaatcgtc
ttcaggatcttcgacaacatgaagctaccggagcagcagaccgagaaagcagagtggatg
accactacatgcaaccatgcactttatgccatctgtgacgttttcacccagtactttgag
tccctcaatggactcctgttggatgacatcctggctcagctctactggtgtgtgcagcaa
gataatgagcagctggctcgttcaggcaccaactgcctagaaaacgtggtcatcctcaac
ggggagaagttctccgccgagacctgggacaagacgtgtaactgcatgctggacatcttc
aagaccaccatcccccactcgttgttgacgtggcgaccagcaggagcagaaggagagcac
tttgcaacacacagcctgactgacaaacagctggactccatatcccagaagtctgtggac
attcagtcccgctctgacgaccagcactccatcagcagcggcgacagagccgcgatggag
agccgccgccagagtcagcacagctcggcgtcgggcgtcttcgaggacggctcgagaagc
aggacctcaacaaagatccaggagcagcgcttgttctctgccctgctcataaagtgcgtc
gtgcagctggagctgatccagaccatcgataacatcgtgtttttccccgccaccagtaag
aaggaggacgcagaaaactttgcagctgctcagcgggatgctgggtgtgctgcggacgtc
caagtggagacgcaggaccaggggatgttccgctatctgacctcggagcagctcttcaag
ctgctggactgcctgctggagtcgcatcgcttcgccaaggctttcaactccaacaacgag
cagagaacgctgctgtggaaagcaggtttcaaaggcaagtcgaagcccaacctgttgaag
caggagaccagcagcctggcgtgtgggctgcgcatcctgttccgcatgtacacggacgag
agccgacagggcgcctgggaggaggtccagaggcggctgctcaacgtttgcagcgaggcg
gtggcgtacttcctggctctgacctcagaaagccacagagaggcctggaccaacctgctg
ctgctcttcctcaccaaggtgctgaagatcagcgacgaaaggttcaaggctcatgcatcc
agatactaccccctcctgtgtgagatcatgcagtttgacctgatccctgaactgcgggcc
gttctcaggaagttctacctgcgcatcggcctcgtctttaacattgcacagctgcctgag
ccagagccggaccccgagccgaggcgtgcagagccagaaacggacatggaggtgggggag
gaagctggggaggaggcccagtga
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integrated database retrieval system
