Xiphophorus maculatus (southern platyfish): 102216825
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Entry
102216825 CDS
T02923
Name
(RefSeq) calmodulin-binding transcription activator 1 isoform X1
KO
K21596
calmodulin-binding transcription activator
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102216825
Transcription factors [BR:
xma03000
]
Eukaryotic type
Other transcription factors
Others
102216825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CG-1
Ank_2
TIG
Ank
Ank_4
Ank_5
IQ
AGRB_N
Motif
Other DBs
NCBI-GeneID:
102216825
NCBI-ProteinID:
XP_023180724
LinkDB
All DBs
Position
20:complement(23689002..23767433)
Genome browser
AA seq
1587 aa
AA seq
DB search
MTVNRQRIHNRGRVVPAVRTGIGLKKIRNPERMVRIAVGYTGHTPPKSDESDANNEPGQL
KIYLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHDEWLTTSPKTRPQNGSMIL
YNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLL
QNPDIVLVHYLNVPAVDDSGKPCGPVLCSINTDRKEWAKWSKEELIGQLKPMCAGSSLHQ
KCSSVKQRIISSKQESGAGGGTAVGTSVAAGQRAEEADGTEVQNSDVSEGQTEPNPGGGR
SRAGGGERRNGRIAKPSLLPQSSMEVSSSTSTNQVEVPDTTQSSPLSIASDMADSPALAI
GTGLSQSTAVFMSEVTTLTGESVYSAGHTHLLASTHESTATGILLAVASDNQRFASFSGG
VGLGEGGELVLSSSLDSGVGVSLPETTMTFDPDCFLNNPKQGQTYGGGGGKTEGCNGDDG
GLHCSTNGFVYNPALVNNIKTEATPLEQPLVTQSSYVGEGTGLSPSTTLEQMDFSAVMSS
ACVSSLNQPSHHPSPGLFLQTSPQTTQPSQLQVNGTKATQESSETRAYIGLPPMVTDSPV
TNGEAHTHLHQVSTDQQALCARNGQAAAVGSFPLTTQDVEQPDSRSHQEVAALEKPTENG
EDLLLKAGDPHEAYASVDAKHFLQPTDDTGGGDEGGGGGGGTENEIICNGVSISGASSSV
VASPQSIGVGANIEGALYSSPLPQQGAGVPATTAGAGAAISLEGFEASFGSQFSDLINDF
ISVEGSGGGVAAAVSGVLMPQEGAVGEEHSTAAGHLQASEVEQGALGLLQETGRLFGVTD
YSPEWSYPEGGVKVLITGPWLESSSEYSCLFDHISVPAALIQPGVLRCYCPAHDTGLVML
QVAMGGEVISSSVVFEYKARDLPALPSSQHDWLSLDDTQFRMSILERLEQMEQRMAEITN
QNPGSEAMATKGGGVEGGGANDQRSQSPPDQSTFEGRVVVVCEKMMSQPCWTSSNQLVHS
KNSRGMTLLHLAAAQGYAGLIQTLICWRTKHADSIDLELEVDPLNVDHFSCTPLMWACAL
GHTEAALVLYQWDPRALAIPDSLGRLPLNIARSRGHTRLAELLEQLQQSPQTKAQPADSW
MEKWKGGSQNRGINSSSSTNPTPEVRRSRTESQPLNQSWSQTGQTPQPGANVEQGGPPPA
KRLKSNPASQQQLANSAPGANTISSLLDSSPRPNPLQSVLPKFQKTELTYQRAPLSSSTP
DRPQFPSAPFSHLQARIRRSEGGNMWSLRRSLGQNSLVRRIQGKERLAIHLRQRVLSDRG
EETELLTYQDNSDDLQVDITMLADHIMDASAGRLKQTTVTETDSAKVGISSDVKSLSGYL
DEVERFLKSKPQATSPKPNSLSGLEEQPTPHANQAPSSPFDWSSFLCAAMQEEKLKTNSS
CLAMTESEQQELYETIRRALHSLRKHKGPIQEQHKEIAAVIQRCYKRYKQYALYKRMTLA
AILIQSRFRSFHEQRKFQQSRRAAVLIQQYYRSYKHSLSSILTKKQNQAARKILRFLLRC
RHRAREQRKARGPENASPGPAHSPISL
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgacggtaaaccgacagcggatccataacagagggagagttgtcccggcggtccgcacc
gggataggactgaagaagataagaaacccagagcgaatggtcaggattgctgttggttac
acaggacacacccctcctaagagtgacgaatcagacgccaacaatgagccaggccagtta
aagatctaccttcccaagaagcttctcgagtgtctacccaaatgttcctctctgcccaag
gagcgccatcgctggaacaccaacgaggagattgctgcatatctcatcacttttgagaaa
cacgatgagtggctgacgacatcgccaaaaaccaggcctcagaatggctctatgatcctc
tacaaccgtaaaaaggtgaagtacaggaaagatggctactgctggaagaagaggaaagac
gggaagaccacccgagaggatcatatgaagcttaaagtccagggggtagagtgtctgtat
ggctgctacgtccactcctccatcatccccaccttccatcgtagatgctattggctgctg
cagaacccagacatcgtgctggtgcactacctgaatgtgccggcagtggatgacagcggg
aagccgtgcggtccggtcctctgctccatcaacacggacaggaaagagtgggccaagtgg
agcaaagaggagctcattggacagctcaaacctatgtgtgccggaagcagcctgcatcag
aaatgttccagtgtgaagcagcgtatcatctcatccaaacaggagtccggagcaggagga
gggacagcagtaggaaccagtgtagcagcaggccagagagctgaggaagcagatggcacg
gaggtccagaacagtgatgtatcggagggccagactgagcccaatcctggcggggggagg
agtcgggcaggtggaggcgagaggaggaatggcaggatagccaaaccttcccttctccca
cagagcagcatggaggtgtcttcttccacctcaaccaaccaggtggaggtacccgacacc
acccagagctcccctctgtctattgccagcgacatggctgacagcccagctcttgccatt
ggcaccggcttgtcacaaagcactgctgtgttcatgtcagaggtcaccactctaactggc
gaatcggtatactcggccggccacacccatctgttggcttcgacccacgagagtaccgcc
acgggtatcctgttggctgtcgcctctgacaaccagaggtttgcatcgttcagtggaggg
gtgggattaggtgaaggaggagagttggttctgtccagctctttagactctggagttgga
gtcagccttcctgagaccaccatgacctttgaccccgactgcttcctcaacaatcccaag
cagggccagacatacgggggaggtggagggaagacagagggatgcaatggtgatgatggg
ggactccactgctccacaaacggctttgtttacaacccggcactcgtcaacaacatcaag
acggaggctacgccactggagcagccactggtgacccagagcagctacgtgggcgaagga
actggccttagccccagcaccaccctggaacagatggacttcagtgctgtcatgtcatca
gcctgtgtctcaagtctgaaccagccttcacaccacccctccccgggcctcttcctccag
acctccccccagacaacccagccctctcagctgcaggtcaacggcaccaaggcaacgcag
gaatccagcgaaacgcgggcctacatcggcctccccccgatggtcactgactctcctgtc
actaacggagaagcgcatacacacctccaccaagtgagcacagaccaacaggcgctgtgt
gcaaggaatgggcaagcagcagcagtcgggtcgtttcccctgacaacacaagacgttgag
caaccagacagcaggagccaccaggaggtcgcagccttagagaaaccgacagaaaatgga
gaagatttactcctcaaggccggagatcctcatgaggcctatgcgagtgttgacgccaag
cattttctccagcccacagatgacaccggagggggggacgagggtggaggtggcggagga
ggaacggaaaatgaaattatatgtaatggcgtgagcatttcaggtgctagtagttcagtg
gtggccagtcctcagtcgataggtgtaggtgcaaacatcgaaggtgctctctacagctct
ccgctacctcagcaaggtgcaggggtaccggcaacgacagccggggccggggcggctatc
agtctggaagggtttgaagcgtcatttggaagccagttctccgatcttatcaatgatttc
atctccgtggaggggtctgggggaggggtggcggcagcagtctctggggtcctgatgccc
caggagggcgcagtaggagaggaacacagcacagcggccggtcacctgcaggcatccgag
gtggagcagggggcattgggactgctccaggagactggcaggctgttcggcgtgacggac
tactccccagagtggtcttatccagaggggggagtaaaggtgttgattactggtccatgg
ttggagtccagcagtgaatacagctgcctcttcgaccacatcagtgtcccagctgccctc
atccagcccggggtgctgcgctgctactgcccagctcatgacacaggactggtgatgctg
caggtggccatgggtggtgaggtcatctcttcttctgtggtgtttgaatataaggcacgt
gatctaccagcactgccatcttctcagcacgactggctgtccctggatgacacccaattc
aggatgtccattctggagcgtttggagcaaatggagcaaaggatggctgaaataaccaat
cagaaccctggctcagaagccatggcaaccaagggtggaggagtggaggggggaggagcc
aatgatcagcggtctcaaagcccccctgatcagagcacatttgagggtcgtgtggtggtg
gtgtgtgagaagatgatgtcccagccctgttggacttcttcaaaccagctcgtccacagt
aagaactccagaggaatgacattgctgcatctggccgcagctcagggatacgcggggctc
atccagacactcatctgctggcgcacaaagcatgccgacagcattgacctggaactggaa
gtggatcctcttaacgtcgaccacttttcctgcacgccacttatgtgggcgtgtgctttg
ggccacactgaggcagcactggttctgtaccagtgggacccaagagctcttgccattcct
gactctctgggtcgcctgccgctgaatatcgcccgatcccgtggtcatactcgattggcc
gagctcttggagcagctgcagcagagtcctcaaactaaggcacagcctgcggacagttgg
atggagaagtggaaaggaggatcacagaacagaggaatcaacagcagctccagcaccaac
ccaaccccagaggtgagaagaagcagaacagagagccaaccattaaaccagagctggagc
caaactggtcaaacaccccaacctggagccaacgtggaacaaggaggtccaccccctgcc
aagcgtctcaaatctaaccccgcgagccaacagcagctcgccaactcagcccccggcgcc
aacaccatcagctccctccttgactcttccccgaggcctaatcctctccaatccgtctta
cccaagttccaaaaaactgagctcacctaccagagagcacctctttccagctccaccccg
gaccggcctcagttccccagtgccccgttctctcacctgcaggccaggataaggaggtct
gaggggggcaacatgtggagcctgagacggtctcttggacaaaacagtctggtccggaga
attcaaggaaaagaacggttggccattcatctgcggcagagagtgctgtccgacagggga
gaggagactgagctgctgacctaccaggataactcagatgacttgcaggtggacatcacg
atgcttgctgatcacatcatggatgcttcagcaggaaggcttaagcagactacggtcact
gaaacagattctgcaaaggttggcatcagtagtgacgtaaagtcactgtctggttacctt
gatgaggtggaaaggtttctgaaatctaagccccaggctacaagccccaaaccaaattca
ctctcagggctggaggagcagccgactcctcatgcaaaccaagcgccctcgtctcccttt
gactggagctccttcctctgtgcagctatgcaggaggagaagttgaaaacaaactcctcc
tgtctagccatgactgagtcagagcagcaagagctgtacgaaaccatcaggcgtgctctg
cactccctcagaaaacacaagggtcccattcaggaacaacacaaagagattgcagcagtg
attcaacgctgctacaagagatacaagcagtatgcactttataagaggatgactttggca
gccatcctgatccagagtcgtttccggagtttccatgagcagaggaagttccagcagagt
cgtagagcagcagtcctcatccagcaatactaccgctcctataagcactccctcagcagc
atcctaactaaaaaacagaaccaggctgctcgcaagatcctgaggttcctgctccgctgc
cgccacagggccagagagcagagaaaggccaggggtcctgagaatgcatcaccaggccct
gcacacagccccatcagcctgtga
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integrated database retrieval system
