KEGG   Xiphophorus maculatus (southern platyfish): 102216894
Entry
102216894         CDS       T02923                                 
Symbol
wdr48
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:xma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    102216894 (wdr48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xma03400]
    102216894 (wdr48)
DNA repair and recombination proteins [BR:xma03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     102216894 (wdr48)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_DCAF4 WD_LRWD1 Beta-prop_Vps41 Beta-prop_IP5PC_F WDR54 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 RAWUL WD40_like Tfb2_C
Other DBs
NCBI-GeneID: 102216894
NCBI-ProteinID: XP_023191242
Ensembl: ENSXMAG00000018756
UniProt: M4AAL7
LinkDB
Position
6:complement(8855890..8866973)
AA seq 677 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVY
QQKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDKKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPAIWVSTTKSSVNKWSLKGMHNFRSSGEYDNDCTTPLTPLCTQPEQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKGEDLGKVEFDEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSSDGSDPKLNLGGLLLQALLEFWPRTRIN
PMDEEENEVNHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSSANDKPGEQEKEEDMAMLAEEKIELMCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggccacgcatcacaggcaaaatgctgctgggcggaggaaagtacaggtttcctatgtg
attagagacgaggtggagaagtacaatcgcaatggagtgaatgctctccagttagaccct
gctctgaaccggctcttcaccgcggggagagactcgatcatccgaatatggagcgtctac
caacaaaaacaggacccatatattgcatctatggagcaccacactgactgggttaatgat
atagttctttgctgcaatggaaaaacattgatatcagcttcatcagatactacggtgaaa
gtgtggaatgctcataaaggattttgcatgtcgacgttacggacgcacaaggactacgta
aaagctttagcgtacgccaaggacaaggagcttgtggcgtcggccggtctggaccggcag
atcttcctgtgggatgtgaacacactgacggcgctcacagcctccaacaacacggtcacc
acttcgtcgctgagtgggaacaaggactccatctatagtctggctatgaaccagatggga
acagttatagtctccggctctactgaaaaggttttgagagtgtgggaccctcgaacgtgt
gcaaagcttatgaagctaaaaggtcacacagacaacgtcaagtcgttgctcctgaatcgc
gatggcactcagtgcctgtcggggagctcggacgggaccatccgcttgtggtcgctcggc
cagcagaggtgcatcgccacatacagggtacacgacgaaggcgtctgggccctgcaggtc
aacgaggccttcacacacgtatactctggaggcagggacaagaagatttactgcacggac
ctgcgaaacccggacatccgtgtgctcatctgcgaggaaaaggccccggtgctcaaaatg
gagctggacagatctgctgacccacctccagcgatctgggtttccaccaccaagtcatct
gtgaataaatggtctctaaagggaatgcacaacttcagatcatcaggggagtacgataac
gactgcaccacccctctgactccactgtgcactcagccagaacaagttattaagggaggt
gccagtattatacagtgccacattttgaacgacaagagacacatactcaccaaagacacc
aacaacaatgtggcgtattgggatgtgctcaaggcttgcaaaggagaagacttgggcaaa
gtggaatttgatgaggagattaaaaagcggttcaagatggtgtacgtgccaaactggttc
tctgtcgatctgaaaaccggaatgctcacaattactctggatgagagcgattgctttgct
gcttgggtgtctgcaaaggacgctgggttttcaagttctgatggatctgatccgaagttg
aacttgggcggcttgttgctccaagctctgctggagttctggcccagaacgcgcatcaac
cccatggacgaggaagaaaacgaggtgaaccacgtgaacggcgagcaggagaacagggtg
cagaaaggaaacggatattttcaggtcccgcctcacacgcccgtcatcttcggagaagca
ggaggaagaactctatttaggctgctatgtagagattcaggcggcgagactgaatccatg
ctgctgaatgagacagtcccacagtgggtcattgatatcacagtagataaaaatatgcct
aaattcaacaaaatcccattttacctccagccccattcttcttctggtgcaaaaactcta
aaaaaggatcgtctctcggccagcgatatgctccaggtgaggaaggtgatggagcacgtt
tacgagaagatcataaacctggacaacgagtcgcagaccaccagctcctcggccaacgat
aaacccggagagcaggagaaggaagaagacatggcgatgctcgccgaggagaagattgag
ctaatgtgtcaagaccaggttctagaccccaacatggacctgcggacagttaaacatttt
atctggaagagtggaggggacttgacacttcactataggcagaagtcgacatga

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