Xiphophorus maculatus (southern platyfish): 102216920
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Entry
102216920 CDS
T02923
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
102216920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102216920
Ion channels [BR:
xma04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
102216920
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
102216920
NCBI-ProteinID:
XP_023183448
Ensembl:
ENSXMAG00000003226
LinkDB
All DBs
Position
22:15688002..15844305
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AA seq
1338 aa
AA seq
DB search
MLAEAHGTDPHGSDSSMRTSSIDNNNNPDSSILISKMEGVVIPYTSEVPCDDYGQRMWWA
FLASSMVTFFGGLFIILLWRTLKYLWTVCCHCNIKNKEAQKVNNPANNPTADKTTKGPDE
KEEAAASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQ
NFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRS
WLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDP
WENFENSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEI
IELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNIS
PNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIM
RVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQG
LSTMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLK
LLLIAIEFKSEQRESRSRKRILINPGNHVKLQEGTLGFFIASDAKEVKRAFFYCKACHDD
ITDPKRIKKCGCKRLIYSKMSVYKRMKLACCFDCGRSERDCSCMSGSVHSNMDTLQRAYP
LSSVSVHDCATTLRAFSSAKYKYNGFVRSPADGATTPRNSGSQKEAGVRFKADCNLVEDE
HPSTLSPKKKQRNGGMRNSPNCSPKMMSRHDPLLIPGNEQIENMDMNVKRYDSTGMFHWC
PSKEIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLVMPLRASNFHYHELKPIV
FVGSLDYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIEDASL
QDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDSSPVHGFVRQASVTTGSN
IPIITELAKPGKLLPLVSLSQESKSGTSIQMITELVNDSNVQFLDQDDDDDPDTELYLTQ
PFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALLAEENALRGGYSTPQ
TLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLGTPSQ
CTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSVP
PSNRQNRSSKSREAREKQNATRMNRMGQEKKWFTDEPENAYPRNIQIKPMSTHMANQVNQ
YKSTSSLIPPIREVEDEC
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgctagccgaggcacatggcacggatccccatggaagcgacagctctatgaggacaagc
agcatcgataataacaacaatccggactcttcgatcttaatatccaagatggaaggcgtt
gtcatcccctacacgtctgaggtgccatgcgacgactatggacagcgcatgtggtgggca
ttcctcgcctcctccatggtgacgtttttcgggggtctcttcatcatcctgctatggagg
accctgaagtatctgtggactgtctgctgccactgcaacataaaaaataaggaggctcaa
aaggtgaataaccctgccaacaatccgacagcagacaaaacaacaaaaggtcctgatgag
aaggaggaggcagcagccagcgaggtgggatggatgacttcagtcaaagactgggctggt
gtcatgatctccgctcagacactcacaggcagggttctggtggtgttagtctttgctctc
agcattggagcccttggaatatactttatagactcctcagatcctatagaatcctgccag
aacttctacaaagattttacactacaaatcgatatggccttcaatgtcttcttcctcctg
tactttggcttgcggtttatagcggccaatgacaagctgtggttctggctggaggtcaac
tcagtggtcgacttcttcaccgttcctcctgtgttcgtctctgtatacctaaacagaagc
tggcttggtttaagatttctgagagcactaagactgattcaattctcagaaatattacag
ttcctaaatattttgaaaacaagcaattccatcaagctggtgaacttgtgttccatcttt
ataagcacgtggctcacggcggctggatttatacatctggtggaaaactcaggggatccg
tgggaaaactttgaaaattcccagtcgctgtcttattgggaatgcgtctacttgctgatg
gtgacgatgtctacagtgggttacggggatgtctatgcaaaaaccaccctgggccgcctg
ttcatggtcttcttcatccttggtggtttggccatgtttgccagctacgtccctgaaatc
atagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggaga
aagcacattgtggtctgtggtcatattaccctcgaaagtgtctccaacttcctcaaagac
ttcctacacaaggacagggatgatgtcaatgtagaaattgtttttctccataatatttcc
cctaatcttgagctggaagccttgttcaaacgccattttactcaagtcgagttctaccag
ggatcggttctcaaccctcatgatttggcccgagtgaagatcgagtcagcggatgcctgt
ctaattttggccaacaaatattgtgcagatcctgatgctgaagacgcttctaacatcatg
agggtcatatccatcaagaactatcatcccaagatcagaataataacacagatgctacag
tatcacaataaggcccatctgctgaacattcccagctggaactggaaggaaggtgatgat
gctatatgcctggctgagctgaaggctggtttcattgcccagagctgtcttgcacagggc
ctgtcgaccatgctggccaatctcttctccatgaggtccttcattgagattgaggaggac
acatggcagaagtattacctagaaggagtagctaatgagatgtacacagagtatttgtcc
agtgcctttgtaggcctctccttccccactgtgtgcgagttgtgctatgtgaagttgaag
ctgttgcttattgccattgaattcaagtctgagcagagagagagcagaagccgaaagcgc
atcctcatcaatccaggcaatcacgtcaagctgcaggagggaacattaggattctttatt
gctagcgatgccaaagaagtaaagcgagcatttttctactgcaaagcttgtcacgatgac
atcacagaccccaaaaggatcaaaaagtgcggctgcaaacgactgatttattccaagatg
tccgtctacaaacgaatgaaactggcatgttgttttgattgcggccgttcagagcgagac
tgctcttgcatgtcaggcagtgtacatagtaacatggacacccttcagagggcctaccca
ctttcctctgtctctgttcatgattgcgcaaccactttacgtgccttctcctcagctaaa
tataagtataatggatttgtcagatcaccagcagatggcgctacaacaccacggaacagt
ggaagccaaaaagaggctggcgttcgattcaaagctgattgcaatctagttgaggatgag
catccatcgactctctcacccaaaaaaaagcagcgcaatggggggatgcgaaactcgccc
aactgctcgcccaaaatgatgagtcgacatgatcccctcctaattcctggaaatgaacaa
attgagaacatggacatgaacgtcaagaggtacgactcgacgggaatgtttcactggtgc
ccttccaaagaaatcgagaaagtcatcctgactcggagcgaagcctccatgactgtgctg
agcggccatgtagtggtctgtatatttggggatgtcacgtccgctttggtggggctgcga
aacctggtgatgcctttaagagccagcaattttcactaccatgaactaaagcctatagtt
tttgtgggctcgctggattaccttcggagagagtgggagactttacacaacttccccaag
gtctccatcttacctggtacaccattaagtcgggcagatttaagggctgtcaacatcaac
ctctgtgacatgtgcgtaatactgtcagccaatcagaacaatatcgaagatgcctctctg
caggataaggaatgcatcttggcatcactcaacatcaagtctatgcagtttgatgacagc
attggggtcttacaggctaattcccaaggtttcacgcctcctggaatggacaggtcatct
ccagacagcagtccagtacatggctttgtgcgtcaggcttcggtaaccaccggatccaac
atccccatcatcacagagctagctaaacctggcaaactactgccattggtttctctcagt
caggaaagtaaaagtggaaccagcatacaaatgataacagagctggtgaatgactcgaac
gttcagttcctggaccaagacgatgacgacgacccagacacggaactgtacctcactcag
cccttcgcctgcggcaccgcctttgccgtcagtgtactcgactccctgatgagtgcgaca
tacttcaacgataacatcctcacactaatccggacactagtcacgggaggagccacgcca
gagctggaggccctgctggctgaggagaacgctctcagaggaggctacagcacgccacag
acgctggccaacagagacaggtgtcgcgtcgcccagctggccctgtatgatggcccgttt
gctgacttaggggacggtggctgctacggtgacttgttctgtaaagccctgaaaacatac
aacatgctgtgttttgggatctacagattaagagatgctcatctcggcacaccaagccag
tgcacaaaacgatatgtgatcacaaaccccccctacgagtttgagctggtgcccacagac
ctgatcttctgcctcatgcagtttgaccacaatgctggccagtcacggacaagcttatcc
cactcttcccactcctcccattcctccagcaaaaagagttcctctgtgcactcggtgcct
ccctccaaccggcagaaccgcagcagtaagagcagagaggcaagggaaaaacagaatgca
acaaggatgaatagaatgggccaagaaaagaaatggtttacagatgaaccggaaaatgcc
tacccaaggaacattcagatcaagcccatgagcactcacatggccaaccaagtcaaccaa
tacaaatccactagtagcctgattccaccaatcagagaagttgaagatgaatgctga
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